Gene Swoo_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0275 
Symbol 
ID6114498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp334489 
End bp336009 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content47% 
IMG OID641631756 
Productflavocytochrome c 
Protein accessionYP_001758671 
Protein GI170724645 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01813] flavocytochrome c
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.26146e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAATA AAGATCTGCT AGGACGCCGT AATTTCATCA AAGGAATGGG AGCGGCTGCA 
GGTGTCGCAA TGGCTGCACC AGCGTTAGCC GTTTCTGAAA ATGCGAATGG CGTTAAATGG
GACAAAGAGG TTGAAGTTCT AATTATCGGT TCAGGCTTTG CAGGTTTAGC TGCTGCAATT
GAAGCGACAC GCAAAGGCGC AAAAGACGTT CATATTTTTG AGAAAATGTC TTACTTTGGC
GGTAATTCAG CAATTAATGG TGGCTTATTT GCAGCACCTG ATACGCCAAT GCAAAAGCAA
GAGGGCGTTA AAGACTCTGT TGATACTATG GTCGCGGATC AGCTAGCGGC TGGCCGTGGT
ATTGCTGATG AAGCACTGCT TCGCCATGTT GCAGAGCATG CTGTCGAAGC TCTGCAGATG
ACGCTAGATG CTGGCTCCGA ATATCACCCA TACCTACAAC AACTTGGTGG TCACTCCGTA
GCACGTACTT ACCAAACGAC GGTCAGCTGT GGTGCTGGTA TAACCCAGCC GCTATTGCAA
GAGTGCCGCA AGCTTGGGGT TCATACCCAT AACCGCGCTA AATTTGATGG TTTTATTTTA
GATGAAAAAG GCGGTGTTGT AGGCGTTAAA ATGCGCGAAG GTTACTACTT CGATAAGCCA
GAATCAGGCA AATTAGTCCG TATTAAAGCT AGGCGCGGCG TGATCATGGC GACGGGGGGC
TTTGCTCAAA ATATCAATAT GCGTATGGCA CAAGACCCAA CATTAACTGC TGAGGTGGGC
TGCACTAACG CACCTGGCGC TACTGGTGAA GGGATGTTCG AAATGTTCCG TCTAGGAGCT
GTTCCGGTCC ACTTGGCGCA TATCCAGTCT GGGCCATGGG CATCACCAGA TGAAGGTGGT
TTTGGTTATG TATCGAACTA CTCTATCTAT AACTTTCCAC ATTCAATCGC GATAGACCGT
TTAACCGGTA AGCGCTTCAT GAATGAAATT GCTGATCGTA AGACCCGTGC TGATGCAGAG
TTGAACTGTC GCGATGCACA AGGTAATCCG CTGCCTCCGA TTTTAATCAC TAGCTATGAA
GATTCTAAGC AGCATCCGAA TACTAAGAAA GTATTGAAAT ACAATGTCGG TTGGAAGTTC
GACTCAATAG ACGCCTTAGC TAAACATTTT GACGTGCCAT TAGCGCCGCT TAAAAAGCAG
ATTGCTGAGT ATAACGACTA CGTTAAGACG CAAAGTGATC CACAGTTCGG CAAGAATATG
ACTGAAGCTA AGGGTAAGTT TATCCAAGCA CCTTTCACAG TGGTTCGTTT ATGGCCAAAA
GTGCATTACT GCCAAGGCGG CGTGCAGATC AACACCAACG CTGAAGTGAA AGATAGCCTA
ACAGGTAAAC CTATCTCAGG TTTATACGCA GCGGGTGAAG TATGTGGTGG TATTCATGGT
GTTAGCCGAT TAGGTAGCTG CTCGATTCCT GAATGTATGG TGATGGGGAT GACTGCTGCT
CGCATCATGA TGCAAGCTTA A
 
Protein sequence
MSNKDLLGRR NFIKGMGAAA GVAMAAPALA VSENANGVKW DKEVEVLIIG SGFAGLAAAI 
EATRKGAKDV HIFEKMSYFG GNSAINGGLF AAPDTPMQKQ EGVKDSVDTM VADQLAAGRG
IADEALLRHV AEHAVEALQM TLDAGSEYHP YLQQLGGHSV ARTYQTTVSC GAGITQPLLQ
ECRKLGVHTH NRAKFDGFIL DEKGGVVGVK MREGYYFDKP ESGKLVRIKA RRGVIMATGG
FAQNINMRMA QDPTLTAEVG CTNAPGATGE GMFEMFRLGA VPVHLAHIQS GPWASPDEGG
FGYVSNYSIY NFPHSIAIDR LTGKRFMNEI ADRKTRADAE LNCRDAQGNP LPPILITSYE
DSKQHPNTKK VLKYNVGWKF DSIDALAKHF DVPLAPLKKQ IAEYNDYVKT QSDPQFGKNM
TEAKGKFIQA PFTVVRLWPK VHYCQGGVQI NTNAEVKDSL TGKPISGLYA AGEVCGGIHG
VSRLGSCSIP ECMVMGMTAA RIMMQA