| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0274 |
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| Symbol | |
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| ID | 6114497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 333029 |
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| End bp | 333949 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631755 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001758670 |
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| Protein GI | 170724644 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000255624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAACTGG AAGATATCTA TCGGCAAGAT CTTAGCTTGC TTATCGCACT ACAAATTTTA
GTTGAGGAGT GCAGCGTCAC TCAGGCAGCC AAGCGTTTGC ACTTAAGCCA ATCAGCAACC
AGCCGTATTC TATCTCGCCT ACGTGAGATG CTGGGCGACC CACTGTTTTC TCGCGTAGGT
CAAAAGCTGG TACCGACTCA GTTTGCCCTA GATTGCTACC AACAGCTGCA ACAACCTACT
GGTCAGTTGA TTGAAATGCT CAGTCCTAAA GCCTTTGTGC CAAACGAATG TCAGCAGCAT
TTTACTTTAG CAGCAACAGA TTATGCGATG CAGGCTCTGA TCCCTTTCAT TCTGCCCGAT
ATCTATAACA AAGCCCCCAA TATCAAGTTA GAGATCATTC CTGTTCAACA TAGAGAGCTG
CAATCACAGC TGAGTGTACA GGGGGCAGAT ATGGCTATCT GCCGAGCCAT AGGCCAAACG
CAACAACTGA ATCAGACATT TTTAGGAAGA GTAGGGGTGA GCTGTTTATT ATCAGCAGAG
CACCCTCTTG CGCATCAAGC ATTAACTTTA GAGGATTATC TGCATTTTCC ACACGCAACC
ATAGCCATCA GCGATGGAGT CAAAGCCCTA CTCGACGCTG CAATAGCAAG TTATCCCCCA
AGAGATGAGT TACTGCGTAC TCCCCACTTA GACAGTGCTT TGGCACTTCT ACAATTTCAC
CCCGCAATTA TCACACTGCC AGCAGGTATC GCCGAACTGG CCGCTTTAAA ACATAGACTC
AGGGTAAAAC CCCTTCCCTT CGATATTCCC CCTTTAGATT ACAACCTATT TTGGCACTCA
AGGGCAGAAC TTGATAAAGC ACAACAGTGG TTAAGAGAAG AGATATCAAA CTCAATACGC
AGACTGCTAA AAGCTGAATA A
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| Protein sequence | MELEDIYRQD LSLLIALQIL VEECSVTQAA KRLHLSQSAT SRILSRLREM LGDPLFSRVG
QKLVPTQFAL DCYQQLQQPT GQLIEMLSPK AFVPNECQQH FTLAATDYAM QALIPFILPD
IYNKAPNIKL EIIPVQHREL QSQLSVQGAD MAICRAIGQT QQLNQTFLGR VGVSCLLSAE
HPLAHQALTL EDYLHFPHAT IAISDGVKAL LDAAIASYPP RDELLRTPHL DSALALLQFH
PAIITLPAGI AELAALKHRL RVKPLPFDIP PLDYNLFWHS RAELDKAQQW LREEISNSIR
RLLKAE
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