Gene Swoo_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0274 
Symbol 
ID6114497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp333029 
End bp333949 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID641631755 
ProductLysR family transcriptional regulator 
Protein accessionYP_001758670 
Protein GI170724644 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.55624e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAACTGG AAGATATCTA TCGGCAAGAT CTTAGCTTGC TTATCGCACT ACAAATTTTA 
GTTGAGGAGT GCAGCGTCAC TCAGGCAGCC AAGCGTTTGC ACTTAAGCCA ATCAGCAACC
AGCCGTATTC TATCTCGCCT ACGTGAGATG CTGGGCGACC CACTGTTTTC TCGCGTAGGT
CAAAAGCTGG TACCGACTCA GTTTGCCCTA GATTGCTACC AACAGCTGCA ACAACCTACT
GGTCAGTTGA TTGAAATGCT CAGTCCTAAA GCCTTTGTGC CAAACGAATG TCAGCAGCAT
TTTACTTTAG CAGCAACAGA TTATGCGATG CAGGCTCTGA TCCCTTTCAT TCTGCCCGAT
ATCTATAACA AAGCCCCCAA TATCAAGTTA GAGATCATTC CTGTTCAACA TAGAGAGCTG
CAATCACAGC TGAGTGTACA GGGGGCAGAT ATGGCTATCT GCCGAGCCAT AGGCCAAACG
CAACAACTGA ATCAGACATT TTTAGGAAGA GTAGGGGTGA GCTGTTTATT ATCAGCAGAG
CACCCTCTTG CGCATCAAGC ATTAACTTTA GAGGATTATC TGCATTTTCC ACACGCAACC
ATAGCCATCA GCGATGGAGT CAAAGCCCTA CTCGACGCTG CAATAGCAAG TTATCCCCCA
AGAGATGAGT TACTGCGTAC TCCCCACTTA GACAGTGCTT TGGCACTTCT ACAATTTCAC
CCCGCAATTA TCACACTGCC AGCAGGTATC GCCGAACTGG CCGCTTTAAA ACATAGACTC
AGGGTAAAAC CCCTTCCCTT CGATATTCCC CCTTTAGATT ACAACCTATT TTGGCACTCA
AGGGCAGAAC TTGATAAAGC ACAACAGTGG TTAAGAGAAG AGATATCAAA CTCAATACGC
AGACTGCTAA AAGCTGAATA A
 
Protein sequence
MELEDIYRQD LSLLIALQIL VEECSVTQAA KRLHLSQSAT SRILSRLREM LGDPLFSRVG 
QKLVPTQFAL DCYQQLQQPT GQLIEMLSPK AFVPNECQQH FTLAATDYAM QALIPFILPD
IYNKAPNIKL EIIPVQHREL QSQLSVQGAD MAICRAIGQT QQLNQTFLGR VGVSCLLSAE
HPLAHQALTL EDYLHFPHAT IAISDGVKAL LDAAIASYPP RDELLRTPHL DSALALLQFH
PAIITLPAGI AELAALKHRL RVKPLPFDIP PLDYNLFWHS RAELDKAQQW LREEISNSIR
RLLKAE