Gene Swoo_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0273 
Symbol 
ID6114496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp330754 
End bp332751 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content39% 
IMG OID641631754 
Producthypothetical protein 
Protein accessionYP_001758669 
Protein GI170724643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.0816e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCTAACC ATATTAAATT AGCGTTAGCT GTTTCAGCTG CGCTATCTAT GTCTGGCTGT 
CTCGAAGTTG AAGATAACAA TAATAACGAT GATGTTGTTG CAGCTTTAGA AGCACAGAAT
CAATTACTGC AAGATCAAAA TACCACTAAT GCACTTCCCA TCACTTTATC GGGAACCTTG
AAAGGGGCGA CAGATGATGT GGACCTGTCC GATGCTCAGG TTTCAATTAA GTTTGCTGGC
GAGTGGTCGA CGCCTGTGCC TATATCAGAT GCTAAAATTT TACTGGAGAA GCAACCTGCC
TATAGTGATT TCACCTTAAA GGTAGAAAGC CCTTCAGAAG CTTTTGTTGC TATGACATAT
AAGTCTATAA CTAGACATTC TGGTCAAGGA CAGGTTGTAA ATCAAGATTT AGGTGAGATC
CTTGTGGGCA AACCTAAAGA GAAGGTTCTG ACTTTATTGC AGACCGGCGA GAATATTTTT
GTTGAAGATC TTGCTGTATA CCCTCTATAT GAAGTGGAGC ATCAAGGGTA CAACATACAT
AATTTAGTGC TGCAACAACC AGAAGAGTTT GCAGGTTTCA CCAAGGAAAC TGGTGAATAT
AAGTTGATAT TGGCTGAGGG GATCCCTACA GAGATTCATG CAGAACTCGA CATTGATAGT
GATGGCGTTA ATGATTTTGA GTTAGAGCTT GGGCAGAGCG GCTTAGCATC TCAACTACTG
AGTTCAAGTA AAGTTTGGGC TGAAGATACG CTTTATCTTA AAGAGATTAA TCAGTTAAAT
GAATACAATT TACGATTAAC TATATTAAAT GAGCAGGGTG AAGTGTTAGA GGATGCGCGA
GTCTCCTCGG AAAATAATGA CCATGGCAAT GCCTATTTTG ATTATGACTC TGTGACTGGC
CAGTATGTAT TAGAAGCAGC CTATCGCGGT TGGCTTAATG TAGAGATTCC TAGCTTTCAG
GTTGGAGAGT TACATTATAC CAGTGCTGAA ATGAGTATCT ATGAAACAGA GTTTGAACAG
CAATACAGAG TTTCTATCTC TGGTTCTCAA TATCGAGTTT TTAGAACTGA AGTGGTAGAG
GGTGAGTTGA ATTTAGCAGT GAACTTATCA ACATTTAGTT ATGAATCTCC ATCAATTGAG
GTTCTTTCTA ACAATGTAAA AGATTCATCT CTTGAGGTCT TCTATTCGGC TCCTGTTGCT
TTAGTTGAAG AAGACAATGT GCAGACAAGT GTTGAGCTTA TGGCAACGGA TGCTATGACT
ATCATTCCTG GTAATACTCA GAACGATCAA GGGATTACTC CAGGTACTAC TTATGTTATG
CATGCTCCAA AGTCGGTAGG TACTAGTGTT GAACTTATGC TTAATGGCAC CAAATTAACA
GCTTCTCCAG CTGCAGAGTT AGCTGATGGG GAGTACCAGT ACCGCGTTGG TGACCTAGTT
AATGTGATTG CCGATGAAGA GCAAAATGTC TATAGCGATG ATTCTGAAGG GTTTACTGTT
TCTAAGTCTG CATTTAATGT GAATGATGTT GTGTTGGATA ATCGAAATTA CACGACTAAT
GGCGCTTTAA TTGTTGCAAA AAATACAGCT GATGTAGTGG TAAATTGTAG CTGGTGTGGG
GGAAGTGGTA ATGTAAGACT TTATACGCCA ACTTCTATTA ACAATCTTGA AGAACTCATT
TTCACATTAA AGTCATACAC TAATAATGGA GTCGTTCAGG ATTACCACAG AGAAATTAGA
GTAGTAGTTG ATGGTCAGCT GTATTCAACA AGTAAAGAGT TTATGTTGAA AGCCGCTCAA
AATGAAAATA TCAGTGCTAA CTATTATTAT CCACAGGTTG GTACGAGTTT GGATTCTGGT
TATCGCTATT CAAACTATAC ATACCTTAAT CTTAATGATG ATGTAGTTGG AAGTGAGAAC
AGTATGACTT TTGATTATAG CTACACCACA AAAGAGGGTG ATACCCAGAC GGGAACAATT
ACTTATAAAG TTAAGTAG
 
Protein sequence
MSNHIKLALA VSAALSMSGC LEVEDNNNND DVVAALEAQN QLLQDQNTTN ALPITLSGTL 
KGATDDVDLS DAQVSIKFAG EWSTPVPISD AKILLEKQPA YSDFTLKVES PSEAFVAMTY
KSITRHSGQG QVVNQDLGEI LVGKPKEKVL TLLQTGENIF VEDLAVYPLY EVEHQGYNIH
NLVLQQPEEF AGFTKETGEY KLILAEGIPT EIHAELDIDS DGVNDFELEL GQSGLASQLL
SSSKVWAEDT LYLKEINQLN EYNLRLTILN EQGEVLEDAR VSSENNDHGN AYFDYDSVTG
QYVLEAAYRG WLNVEIPSFQ VGELHYTSAE MSIYETEFEQ QYRVSISGSQ YRVFRTEVVE
GELNLAVNLS TFSYESPSIE VLSNNVKDSS LEVFYSAPVA LVEEDNVQTS VELMATDAMT
IIPGNTQNDQ GITPGTTYVM HAPKSVGTSV ELMLNGTKLT ASPAAELADG EYQYRVGDLV
NVIADEEQNV YSDDSEGFTV SKSAFNVNDV VLDNRNYTTN GALIVAKNTA DVVVNCSWCG
GSGNVRLYTP TSINNLEELI FTLKSYTNNG VVQDYHREIR VVVDGQLYST SKEFMLKAAQ
NENISANYYY PQVGTSLDSG YRYSNYTYLN LNDDVVGSEN SMTFDYSYTT KEGDTQTGTI
TYKVK