| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0273 |
|---|
| Symbol | |
|---|
| ID | 6114496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 330754 |
|---|
| End bp | 332751 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641631754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001758669 |
|---|
| Protein GI | 170724643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000050816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACC ATATTAAATT AGCGTTAGCT GTTTCAGCTG CGCTATCTAT GTCTGGCTGT
CTCGAAGTTG AAGATAACAA TAATAACGAT GATGTTGTTG CAGCTTTAGA AGCACAGAAT
CAATTACTGC AAGATCAAAA TACCACTAAT GCACTTCCCA TCACTTTATC GGGAACCTTG
AAAGGGGCGA CAGATGATGT GGACCTGTCC GATGCTCAGG TTTCAATTAA GTTTGCTGGC
GAGTGGTCGA CGCCTGTGCC TATATCAGAT GCTAAAATTT TACTGGAGAA GCAACCTGCC
TATAGTGATT TCACCTTAAA GGTAGAAAGC CCTTCAGAAG CTTTTGTTGC TATGACATAT
AAGTCTATAA CTAGACATTC TGGTCAAGGA CAGGTTGTAA ATCAAGATTT AGGTGAGATC
CTTGTGGGCA AACCTAAAGA GAAGGTTCTG ACTTTATTGC AGACCGGCGA GAATATTTTT
GTTGAAGATC TTGCTGTATA CCCTCTATAT GAAGTGGAGC ATCAAGGGTA CAACATACAT
AATTTAGTGC TGCAACAACC AGAAGAGTTT GCAGGTTTCA CCAAGGAAAC TGGTGAATAT
AAGTTGATAT TGGCTGAGGG GATCCCTACA GAGATTCATG CAGAACTCGA CATTGATAGT
GATGGCGTTA ATGATTTTGA GTTAGAGCTT GGGCAGAGCG GCTTAGCATC TCAACTACTG
AGTTCAAGTA AAGTTTGGGC TGAAGATACG CTTTATCTTA AAGAGATTAA TCAGTTAAAT
GAATACAATT TACGATTAAC TATATTAAAT GAGCAGGGTG AAGTGTTAGA GGATGCGCGA
GTCTCCTCGG AAAATAATGA CCATGGCAAT GCCTATTTTG ATTATGACTC TGTGACTGGC
CAGTATGTAT TAGAAGCAGC CTATCGCGGT TGGCTTAATG TAGAGATTCC TAGCTTTCAG
GTTGGAGAGT TACATTATAC CAGTGCTGAA ATGAGTATCT ATGAAACAGA GTTTGAACAG
CAATACAGAG TTTCTATCTC TGGTTCTCAA TATCGAGTTT TTAGAACTGA AGTGGTAGAG
GGTGAGTTGA ATTTAGCAGT GAACTTATCA ACATTTAGTT ATGAATCTCC ATCAATTGAG
GTTCTTTCTA ACAATGTAAA AGATTCATCT CTTGAGGTCT TCTATTCGGC TCCTGTTGCT
TTAGTTGAAG AAGACAATGT GCAGACAAGT GTTGAGCTTA TGGCAACGGA TGCTATGACT
ATCATTCCTG GTAATACTCA GAACGATCAA GGGATTACTC CAGGTACTAC TTATGTTATG
CATGCTCCAA AGTCGGTAGG TACTAGTGTT GAACTTATGC TTAATGGCAC CAAATTAACA
GCTTCTCCAG CTGCAGAGTT AGCTGATGGG GAGTACCAGT ACCGCGTTGG TGACCTAGTT
AATGTGATTG CCGATGAAGA GCAAAATGTC TATAGCGATG ATTCTGAAGG GTTTACTGTT
TCTAAGTCTG CATTTAATGT GAATGATGTT GTGTTGGATA ATCGAAATTA CACGACTAAT
GGCGCTTTAA TTGTTGCAAA AAATACAGCT GATGTAGTGG TAAATTGTAG CTGGTGTGGG
GGAAGTGGTA ATGTAAGACT TTATACGCCA ACTTCTATTA ACAATCTTGA AGAACTCATT
TTCACATTAA AGTCATACAC TAATAATGGA GTCGTTCAGG ATTACCACAG AGAAATTAGA
GTAGTAGTTG ATGGTCAGCT GTATTCAACA AGTAAAGAGT TTATGTTGAA AGCCGCTCAA
AATGAAAATA TCAGTGCTAA CTATTATTAT CCACAGGTTG GTACGAGTTT GGATTCTGGT
TATCGCTATT CAAACTATAC ATACCTTAAT CTTAATGATG ATGTAGTTGG AAGTGAGAAC
AGTATGACTT TTGATTATAG CTACACCACA AAAGAGGGTG ATACCCAGAC GGGAACAATT
ACTTATAAAG TTAAGTAG
|
|---|
| Protein sequence | MSNHIKLALA VSAALSMSGC LEVEDNNNND DVVAALEAQN QLLQDQNTTN ALPITLSGTL
KGATDDVDLS DAQVSIKFAG EWSTPVPISD AKILLEKQPA YSDFTLKVES PSEAFVAMTY
KSITRHSGQG QVVNQDLGEI LVGKPKEKVL TLLQTGENIF VEDLAVYPLY EVEHQGYNIH
NLVLQQPEEF AGFTKETGEY KLILAEGIPT EIHAELDIDS DGVNDFELEL GQSGLASQLL
SSSKVWAEDT LYLKEINQLN EYNLRLTILN EQGEVLEDAR VSSENNDHGN AYFDYDSVTG
QYVLEAAYRG WLNVEIPSFQ VGELHYTSAE MSIYETEFEQ QYRVSISGSQ YRVFRTEVVE
GELNLAVNLS TFSYESPSIE VLSNNVKDSS LEVFYSAPVA LVEEDNVQTS VELMATDAMT
IIPGNTQNDQ GITPGTTYVM HAPKSVGTSV ELMLNGTKLT ASPAAELADG EYQYRVGDLV
NVIADEEQNV YSDDSEGFTV SKSAFNVNDV VLDNRNYTTN GALIVAKNTA DVVVNCSWCG
GSGNVRLYTP TSINNLEELI FTLKSYTNNG VVQDYHREIR VVVDGQLYST SKEFMLKAAQ
NENISANYYY PQVGTSLDSG YRYSNYTYLN LNDDVVGSEN SMTFDYSYTT KEGDTQTGTI
TYKVK
|
|---|
| |