| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0254 |
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| Symbol | |
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| ID | 6114477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 309743 |
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| End bp | 310945 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631735 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001758650 |
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| Protein GI | 170724624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.662405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGTA ATCTGTTACC TATCTTAATG TCAATGGTGG TATTAAGTCC TTTAGCCATC
GATATCTACC TGCCCTCTAT GCCTGCGATG GCGACTGAGT TTGCTGTGTC TGCCAGTGAT
GTGCAGTCAA CCTTAATCCT TTTCCTGTTT GCGATGGGTG TGGGTCAGAT AGTGATAGGT
CCTTTAGCGG ATCGTTTTGG TCGCCGTCCA ATCGCATTGG GTGGTGTGTT GTTGTATATC
GCCAGCAGCA TATTGGCTGC TGTTGCTATG GAGTTTCACT GGTTACAGAT AGCAAGGGTG
CTACAGGGAC TAGCTGCCTG CTCCACCTCG ATAGTGGTGT TTAGTGCTGT TCGCGACTGT
TTTACGCCTA AAGAGGGGGC CCGTTACTAC AGTTATCTCA ATGGGGTTAT CTGTGTTATT
CCAGCCTTAG CCCCAACATT AGGTGGCCTG CTTGCTCTGC AGTTTGGTTG GCGTTCAACC
TTCGTATTTA TGACGCTTTA CGCCATTGTA ATGATGATCT TGATTGGCTA TCGCCTTCCA
GAAACTCGTC CTGCAAACAC AGTAACGACT GGTCCACTCT ATCGTTGGTC ACGCTATCAG
CCAGTACTTG TTGAGCCACA CTTTGTCTTC TATGCACTTT GTTGTATGGC TGGTATGGCA
TCAATTTTAA GCTATGTTTC ATATGCACCT GTTTGGCTTA TCGATAATTT GGGCGTATCA
GAGTTAACCT TTAGTGGCCT GTTTGGACTC AATGCGGTCG TTAATATCGC AGCCTGTTTT
GCAGCACCTA TGGTGATCAA TCGATTAGGT AACCGTCCGA CTGTGATATT AGCTCTGGTT
ACTATGCTCG CGTCAGCACT TATTCAAGTG TTATTGCAGG GCGTAGGGCC GACTCAAGGC
TTAGCAGCTG CATTTAGCTT TATGCTACCT ATGATGTTGC TTTGTATTGG CTTTGCTCTT
TTATTGGGCC CTGCAACCAG TATGGCTCTG GCCGCTTTCG GTGAGAGAGC GGGAACAGCA
ACAGCGATAT TAGGCTTTAT TCAGATGAGT GGTGCTTCTT TGATTGCAGG TTTAGTACAG
CAAACGGAGT TGACTGCTCC CTATGCGGTG GCAGTTGTGA TGGGCGCTCT GACTTCTGGC
CTACTCATAG TGATGGCGAT GTCACGCTTC GATCACTGGC ATCAAGAGCA GTATGCTCAT
TAA
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| Protein sequence | MRRNLLPILM SMVVLSPLAI DIYLPSMPAM ATEFAVSASD VQSTLILFLF AMGVGQIVIG
PLADRFGRRP IALGGVLLYI ASSILAAVAM EFHWLQIARV LQGLAACSTS IVVFSAVRDC
FTPKEGARYY SYLNGVICVI PALAPTLGGL LALQFGWRST FVFMTLYAIV MMILIGYRLP
ETRPANTVTT GPLYRWSRYQ PVLVEPHFVF YALCCMAGMA SILSYVSYAP VWLIDNLGVS
ELTFSGLFGL NAVVNIAACF AAPMVINRLG NRPTVILALV TMLASALIQV LLQGVGPTQG
LAAAFSFMLP MMLLCIGFAL LLGPATSMAL AAFGERAGTA TAILGFIQMS GASLIAGLVQ
QTELTAPYAV AVVMGALTSG LLIVMAMSRF DHWHQEQYAH
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