| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0253 |
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| Symbol | |
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| ID | 6114476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 308679 |
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| End bp | 309635 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631734 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001758649 |
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| Protein GI | 170724623 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.88055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAG ATAATCTATC GAGAATAGAT CTTAACCTGC TGGTTATTTT GCAGGTGCTG
CTTGAAGAGC AAAGTGTGAC TCGTGCGGCA AGTCGTCTCC ATGTCAGTCA ATCGGCATTG
AGTAAGAGCC TTAATCGTTT GCGCGAAGCC CTTGGCGATC CTCTGTTTAT TCGTACATCC
CACGGACTCA AGCCCACCTC ACACGCCATG CAGCTCGGCA CTAAGTTGCC AGATATGTTG
CAGGGACTTT ATCAACTCAC ACAGCCTCCT AGTTTCGTGC CCGCCAGCAG TGATCGTCAC
TTCTCATTTG CCATGGTAGA GAGTGCCTAT GAGACCTTAC TCCCCTACTT TATCGGGCCT
ATTCTCAATA ATGCTCCTAA CCTAAAGCTA GACAGTTATG TGTGGATGGA GCAATCGATA
CAGTCACTTC AGAATGGCCA GATAGATTTT GGAATATCAG GGCGAGATCT CCATCCACAA
TCAGACTTCC AGATAGATCA CTTGCCAGAT GGTATCGCTC ACCAAACCCT ATTTACCGAC
CATCAGGTAT GCCTTGTTAG AGAGGACCAC CCAATTCTTG CCGCCGTAGC CGCAAAGCAG
TGGGATCTTC AGGTCTACCT TGAGATGTCT CATGTGCAAG TACGCTGTGA AGGTAACGAT
TGGTGGGCAC TGGACTATCA TCTTGCCGAG CTGGGGCACA GACGCAGATT AAGTACCACA
GTCCCTGACT TTTACGGCGC TGCAAGTGTA TGCGCCCATA GCGATCTTAT CTTTACACTC
CCCTCCAGCT TTGCTCGACA TGCGATAAAG CTATATCCGC TCGTGGAGTT GGCATTGCCG
TTTGAGTTTA TTCCACTAGC TTATGTGTTG CTGTGGCATG AGAGAAACGA TGAGGAGCCA
GGACACAGAT GGGTCAGAGA CACGATTTGC AAGAGTGTGG CCAAGGCCTT TAACTAG
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| Protein sequence | MSLDNLSRID LNLLVILQVL LEEQSVTRAA SRLHVSQSAL SKSLNRLREA LGDPLFIRTS
HGLKPTSHAM QLGTKLPDML QGLYQLTQPP SFVPASSDRH FSFAMVESAY ETLLPYFIGP
ILNNAPNLKL DSYVWMEQSI QSLQNGQIDF GISGRDLHPQ SDFQIDHLPD GIAHQTLFTD
HQVCLVREDH PILAAVAAKQ WDLQVYLEMS HVQVRCEGND WWALDYHLAE LGHRRRLSTT
VPDFYGAASV CAHSDLIFTL PSSFARHAIK LYPLVELALP FEFIPLAYVL LWHERNDEEP
GHRWVRDTIC KSVAKAFN
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