| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0233 |
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| Symbol | |
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| ID | 6114456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 288118 |
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| End bp | 290634 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631714 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_001758629 |
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| Protein GI | 170724603 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.900015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA GAAGTTTCTT AAAAATGAGT GCAGCTCTGG GCTGTGCAGC AAGTGTGACT
GGCTGTAAAA CCAGTTCAGA TGACGCCAAT GTCGTGCCGC CAAAACCACC AGTAGGTGAA
GAGCAGATCA CTTGGTCATC TTGCTTAGTT AACTGTGGTT CTAACTGCCC AGTTAAAGTG
TTCAGCCGTG ATGGTGTTAT TACTCGTGTT GAAACCGATC ATGATGTGGT TGACGGTGAT
GATATCTACC AAGTTCGCGC CTGTGCTCGT GGTCGTTCAC TGCGCCAGCG CACCTATGCT
GTCGATCGTT TAAAGACACC GATGAAGCGC GTTGGTAAGC GTGGTGAAGG TAAGTTTGTG
CCAATTAGCT GGGATGAAGC TGCTAAGACT ATTGGTACTA AGCTATCGTC TGTGATCAAT
GAGCATGGTA ACAAAGCGAT TTTCCGCAGC TACGGCTCTG GTGCTTACTA CGGTTTTGCA
TCGAATGCGT GTTTCAACCG TTTGTTTAAC CTAAACGGTG GCTGTTTAAA TGCCTATGGT
AACTACTCTT GGGCTCAGCA GATGGAGGCG GCTAAACACA CCTTCGGTAC AGGCAGTACC
ACTGGATCTT CAACTGTTAC TTTATCGAAC AGTGACTTCC TATTAGGCGT TGCTTATAAC
CCAAGCGAAA TTCGCCAGTC GGGTTCAGGT GAAGGTTATG ACTACTTAAA GGCGCTGCAA
AAGAGCAACG GCCTAAAAGT GGTGATGATC GATCCACGCT ACACCGACTC TATGTTAGGT
AAAGAGTCTA AGTGGCTACC AATTCGTCCT GGCACCGATG CGGCCTTTGC TGAAGCGATT
GCATATCAGA TGATCAGCTC AGGTTGGGTT GATGCTAACT CGCTTGATTT TATCAACAAG
TATGCCGTAG GTTTCGACGC AGATTCTATC GCAGCCCAGC AAGCGCTGTT TGCAGCAAGT
GGTGATGCCA CTAAGCAAGA ATACGCTAAG GTGATGAAGC CGGAAGAGAA CTACCGTGAT
TATATTTTAA GCCAAGGTAT CTATTCGGAT CAGCCGTTAA AAACGCCAGA GTGGGCAGAA
AAGATCACCG GTATTCCAGC TGCACAGCTA GAGCAGATTG CCACTGACTT ACAGAATGCT
AAAGCGCCAT ATATCGTCGT TGGTGCTGGT GTTAACCGCC AGGCAAACGG TGAGCAGAGC
ATGCGTGCCC TGTATATGCT GTCGGTACTT ACGGGCAAGT TAGGTACGCT TGGTTCATCT
AATGGTGAGC TGCCATACAT GAGCAGCATG TCTCGTGCGG GTATTCCAAC AGGCAGCAAC
CCAGTTAAAG AGAGCATCTC TTTCTTTACT TGGTCTGAAG CGATTCACCA TGGCGAAACC
ATGACGGCAC GTAGTCACGG AGTTCGTGGC ACTGACGGTT TAGATACGCC ACTTGGTACT
AACATCAAGG TGATCATCTC TGCATCTGAC AGTTCATTGT TGAACCAGCA TGCTGAGATC
AACAACACTG CCAGAATCTT AGAAGATGAA ACCGGTGTTG AACTTATTGT TAGCTGTGAT
TGCTGGATGA CGCCGGGCGC TAAATTTGCC GACATTATTC TGCCTGATAC CAGCTGGTTA
GAGTCAAACG ATCTCGTTAA CGACAGCTAC GCATCTGGTG CGTTAGGTTA TATCACCGCG
ATGAAGTCGG CGATTGAGCC TATGTGGGAC TGCAAGTCTA TGTATGAAGC GGCTGCACTT
ATCGCTAAGT ATATGGGTTG TGAAGCTGAA TTCACCGAAG GCAAGACTGA AGAGCAGTGG
CTTGAAGAGC TTTACCAAAA AACCAAAGAT AACAGTAACA ATCTAGGGGT TTACCCTGCA
TTCCCTGCCA CTTACAAAGA GGCGCAAGAG ATTGGCTTCT TCCGTAAGAA CATGAACGAC
AAGCATGTTG CGCTGGAGAG CTACATTAAA GGTGGTAAGC CACTATCGAC CCCAAGTGGC
AAGATTGAGA TCTACTCAGC TGAACTAGCA TGGCGCGCTG CTAACTGGGA TCAAGAGTCA
AAGACTCAAG TTAAGGGTGA CACTATTACT GCTATTCCTC AGTACACAGT GACTTGGGAT
GGTTATGAAG ACACTGATAC CAGCACTGAT TTTCCATTCC AGTTAGCGGG TTACCACACT
AAGGGTCGCA CTCATTCTAG CTACCACAAT GTGCCTTGGC TTCGTGAAGC GGTAGAGGAT
GCTGTTTGGG TGAACCCAAT GGATGCATCT GAGCAGGGGC TCAACTCTGG TGATGAGATT
GAGATGTACA ACGAGCGCGG ATCGATTGCC GTGAAGGTGC GTATCACTCC ACGTGTTGCA
CCTGGTGTGT TAGCGCTGGG GCAGGGAGCT TGGTTCAAGC CTGGTAATAC ACTAGGCAGT
ACTGGCCATA TTATCGATGA AGGTGGCGCG ATTAACTCGC TAACTCGCTA TCAGCCAAGC
CCAGTCGCTA AAGGCAATCC ACAGCACACT AACCGTGTTG CCATTAAAAA GATTTAA
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| Protein sequence | MERRSFLKMS AALGCAASVT GCKTSSDDAN VVPPKPPVGE EQITWSSCLV NCGSNCPVKV
FSRDGVITRV ETDHDVVDGD DIYQVRACAR GRSLRQRTYA VDRLKTPMKR VGKRGEGKFV
PISWDEAAKT IGTKLSSVIN EHGNKAIFRS YGSGAYYGFA SNACFNRLFN LNGGCLNAYG
NYSWAQQMEA AKHTFGTGST TGSSTVTLSN SDFLLGVAYN PSEIRQSGSG EGYDYLKALQ
KSNGLKVVMI DPRYTDSMLG KESKWLPIRP GTDAAFAEAI AYQMISSGWV DANSLDFINK
YAVGFDADSI AAQQALFAAS GDATKQEYAK VMKPEENYRD YILSQGIYSD QPLKTPEWAE
KITGIPAAQL EQIATDLQNA KAPYIVVGAG VNRQANGEQS MRALYMLSVL TGKLGTLGSS
NGELPYMSSM SRAGIPTGSN PVKESISFFT WSEAIHHGET MTARSHGVRG TDGLDTPLGT
NIKVIISASD SSLLNQHAEI NNTARILEDE TGVELIVSCD CWMTPGAKFA DIILPDTSWL
ESNDLVNDSY ASGALGYITA MKSAIEPMWD CKSMYEAAAL IAKYMGCEAE FTEGKTEEQW
LEELYQKTKD NSNNLGVYPA FPATYKEAQE IGFFRKNMND KHVALESYIK GGKPLSTPSG
KIEIYSAELA WRAANWDQES KTQVKGDTIT AIPQYTVTWD GYEDTDTSTD FPFQLAGYHT
KGRTHSSYHN VPWLREAVED AVWVNPMDAS EQGLNSGDEI EMYNERGSIA VKVRITPRVA
PGVLALGQGA WFKPGNTLGS TGHIIDEGGA INSLTRYQPS PVAKGNPQHT NRVAIKKI
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