| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0230 |
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| Symbol | |
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| ID | 6114453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 282283 |
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| End bp | 284472 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631711 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001758626 |
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| Protein GI | 170724600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT CAAAAATTAG TCAGCTCATT TTATTGAGCT ACCTTTTACC AAGCGCTGTG
TGGGCTGCTG ACATTGAAGA AAATGAAAAA ATAGATGCCA GCAAACTAGA AGTGATTACG
GTTACAGCTC AAAGGCGAGG AGAAAATATT CAGAAAGTGC CTGTTGCTGT CACAGCAATG
AATGCTGAGA TGTTAGAGAA ACAAGATGTA CATGATCTCA ATACTATCGC CACGCGAGTG
CCGGGATTAT CTTTCAGTCC ATTTGCACCA GGGCAAAATA TTATTAGCCT TCGAGGGGCC
TCCTCAAATG ACGATGGCGC TGGCACCGAC AACTCAGTTG CAGTCTTTGT TGATGATGTC
TATTTAGGTC GAGTTTCCAA CGTTAATCCT GAGATGTTTG ATATTGAACG CGTCGAAGTA
CTGCGTGGTC CACAAGGTAC TTTGTATGGT AAAAACACCA TAGGTGGCGC GATTAATATT
ATTTCAAAAC TGCCTAGTTT GGATGAGCTT GATGCAAAGC TTAGGCTCAA TATTGGTAAC
TATGGTCGTC GTGATGTGGC TGGGTACATT AACGGTCCAC TCGGTGACAA CATCGCCGCG
AAATTGAGTT TCTCAAGTCG TAAAAATGAT GGTTGGGTTG ATAATGTTAC GTTAAACAGT
AAGCAAAAAG ATAATGATGT GTTTGCTGGT CGAGCTCAGC TGTTATATGA AGGCGATAAC
TTTCAAGCGC TATTCAGCGG TGACTATTCC AAACTTGATG TGACTGACAT GGCGCGTACT
CCAGTAGATA CAGGTGCAAA AGGTGATCCT GCCGTGTGGT CGCCTGCCTA TGTTGCCGCT
TGTAAAGAGG GAGCTCCATT TTGTGCAGCT GGCGCTGTTG ATGGTTATGC TAAGCAAAAA
GCCTATGGCG TTAGCGCTAA GTTAACTTGG GATCTCGATT TAGGTGAGTT GATTTCAATC
AGTGCTTATC GTGACAGTGA ATCTGACTGG AATATGGATG CAACAGGTTC ACCAGCCCTC
GCGCTTATCG ATGATATTAT TGATAATAGT GACCAGTTCT CGCAAGAGTT CAGGTGGGTA
GGGCAAACTG ACAGCTTTAA TTATGTCGCT GGTGCTTGGT ACATGAACGA GAATACTGAT
CGTAGCGAAT GCTTTGATTT AAGTCTTGAT ACCGATTGTT CAACAGGAAT GGATGGTAGT
GATTTCTACC ACCAAGTCAA TGAAACCAAC AGCTACGCGT TATTTGGCCA ATTTGATTGG
AAATTCACAA CAGATTGGAT ACTGACTGTA GGTGGTCGAT ATTCCTATGA AACCAAAGAG
ATTGATAACG TCGCAAAGGC GGGTGATTTT GTGATTATCA ATGAGAATTT TGGTATTGAC
AGTCCGGTGA CTTTAAAGGA AAGTTGGGGG GCATTTACGC CTAAAGTAGC GCTTAAATAT
ACTGTTTCTG ATGACACCAC GGCTTACTTA AGCTTTGCAA AAGGTTTTAA AAGTGGTGGA
TTTGCTGCAG CACCGCAGTC GTTAGCTGAA ACAAAACCGC TGGAACCAGA AGAAGCGACC
AATTTTGAAT TTGGTATAAA GTCAGACATT AGTGATACCT TTCGTCTCAA CACCACTATT
TTCCATACAG ACTACAAAAA TCTGCAAATT CAAAGTTTTG GTCCTAGAAG TAGTGGCGAA
GATTTTGGCG TTTTCAACAC CTTCAATGCC GGTGATGCAA AAATTGATGG TATTGAATTA
GAGTTCACTT GGCTACCTAC TGATAACCTC AAGCTCTATG GTTTTTATGG CTACATGGAC
AGTGAATTTG TCGATACCGT GGTTCCTAAC TCTGCTTACC CAAATCAGTC CGGTCAGGAG
ATGCTTAGAA CGCCTAAGAA TAAATACTCA ATCAACTTAG AGCACAATAT TGACCTCGAT
TCTGGCGATT ACTTCACGAC AAACCTAAAT TATCGTTTCA CTGATGAGCA GCGTGGAGAG
CTTGAACCTT ATGCCATTCA ACCTGCATTT AAGTTATTGG ATGCCAGCTT TACATGGCAT
TCGGCAAACG ATAATTGGGA AGTCTCAATA TGGGGAAAAA ACCTCACTGA AGAGGTGTAC
ATTACTCATG TCTACACAGT GGCTTCAAGC GTTGTTGCCG TATATGGCGA ACCAAGAATG
TATGGTGTTT CAGTCTCATG GAGCATGTAG
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| Protein sequence | MKTSKISQLI LLSYLLPSAV WAADIEENEK IDASKLEVIT VTAQRRGENI QKVPVAVTAM
NAEMLEKQDV HDLNTIATRV PGLSFSPFAP GQNIISLRGA SSNDDGAGTD NSVAVFVDDV
YLGRVSNVNP EMFDIERVEV LRGPQGTLYG KNTIGGAINI ISKLPSLDEL DAKLRLNIGN
YGRRDVAGYI NGPLGDNIAA KLSFSSRKND GWVDNVTLNS KQKDNDVFAG RAQLLYEGDN
FQALFSGDYS KLDVTDMART PVDTGAKGDP AVWSPAYVAA CKEGAPFCAA GAVDGYAKQK
AYGVSAKLTW DLDLGELISI SAYRDSESDW NMDATGSPAL ALIDDIIDNS DQFSQEFRWV
GQTDSFNYVA GAWYMNENTD RSECFDLSLD TDCSTGMDGS DFYHQVNETN SYALFGQFDW
KFTTDWILTV GGRYSYETKE IDNVAKAGDF VIINENFGID SPVTLKESWG AFTPKVALKY
TVSDDTTAYL SFAKGFKSGG FAAAPQSLAE TKPLEPEEAT NFEFGIKSDI SDTFRLNTTI
FHTDYKNLQI QSFGPRSSGE DFGVFNTFNA GDAKIDGIEL EFTWLPTDNL KLYGFYGYMD
SEFVDTVVPN SAYPNQSGQE MLRTPKNKYS INLEHNIDLD SGDYFTTNLN YRFTDEQRGE
LEPYAIQPAF KLLDASFTWH SANDNWEVSI WGKNLTEEVY ITHVYTVASS VVAVYGEPRM
YGVSVSWSM
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