| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0225 |
|---|
| Symbol | |
|---|
| ID | 6114448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 275714 |
|---|
| End bp | 276313 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641631706 |
|---|
| Product | regulatory PhaM protein |
|---|
| Protein accession | YP_001758621 |
|---|
| Protein GI | 170724595 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.436924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAT TTGCCATTGA GCAGCACATC CCGGTTATTG AACCAACGAG CTTTATCCAC
CCTAATGCCA CTATCATTGG GGATGTGATC ATTGGTAAAC ATTGCTACAT CGGTTCCAAC
GCTTGTTTGC GGGGGGACTT TGGCAGAATA GAGATCCACG ACTTTTGTAA TGTGCAGGAC
AACTGCGTAC TGCACAGTTT TCCATTGCAG GCGTGTGTTC TTGAGGAGTA CAGCCATATA
GGGCATGGTG CGATTTTGCA TGGTTGCACC ATAAGACGGC ATAGCTTGGT TGGCATTAAC
GCTGTGGTGA TGGACTTCGC TGACATTGGC GCCGAATCTA TCATTGGTGC AGCGTCGTTT
GTTAAAAGCC GATTCAACTG CCCTGCGCGT TCCATGTTGC TCGGATCCCC AGCAAAAATC
GTTCGTCAGG TGTCTGATGA AGAATTCCAG TGGAAGACCC GTGGTACAGA TGAATACATC
GAACTGACTC GACGCTGCCA AACGAGTCTT AGAGAAGTGA CTCCATTGAC GACTGTTGAG
GAAAATCGTC CGATGTTCCA GCCTGCACAG GTTCATCAAC CGAAAAATAG CAGCAATTAA
|
|---|
| Protein sequence | MPIFAIEQHI PVIEPTSFIH PNATIIGDVI IGKHCYIGSN ACLRGDFGRI EIHDFCNVQD
NCVLHSFPLQ ACVLEEYSHI GHGAILHGCT IRRHSLVGIN AVVMDFADIG AESIIGAASF
VKSRFNCPAR SMLLGSPAKI VRQVSDEEFQ WKTRGTDEYI ELTRRCQTSL REVTPLTTVE
ENRPMFQPAQ VHQPKNSSN
|
|---|
| |