| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0209 |
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| Symbol | |
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| ID | 6114432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 258458 |
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| End bp | 260167 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641631690 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_001758605 |
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| Protein GI | 170724579 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000199478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATTG AAAAGACAGC TGAGCTGAAC CTATTATGGG GCACGCTTAT TTTAGAAGAG
CTATCCCGCT TAGGCGTGCA ACATATCTGT ATGGCACCGG GCTCACGCTC GACACCGCTC
ACCTTAGCGG CGGCAAAACA GAGCAAATTA AAGCAACATC TGCACTTCGA TGAGCGTGGA
CTCGGCTTTA TGGCACTAGG ACTGGCTAAG GCCAGCCAAG CTCCCGTTGC AGTTGTTACC
ACTTCAGGTA CTGCGGTAGC GAATCTATAT CCAGCAGTGA TTGAAGCCTG GTTAACTCAT
GTCCCGCTAA TCGTATTATC AGGTGATAGA CCGCCGGAGC TTATCGATTG TGGTGCCAAT
CAAGCCATCA TTCAGCCCGC TATCTTTGCT CAATATGCAA AACAGATAAA CCTATCGACA
CCGGATCTGG CTATCCGCCC CGAAGCACTA CTGACCTTGC TCGATGAAGC CATCAGTAAC
CAAAGCCAAC CTCTGCACAT CAACTGCATG TACAGAGAGC CACTTTATCC GTCGACCATG
AGTGCGAACT TTACCCAATA CCTGAGCACA CTCGGCAACT GGCAGCACAC CAATCATGCT
TATAATCAGT ATGGAAAACC TAACCTAAGC AGCTTGCCAA GCAGTGATGC CATGGCACGC
TTTGTTCACG GTAAAGGCGT TATTATCGCT GGCACACTCA CACCAGATTG TGACCCACAA
GCTCTAGTTG CCCTGTCGCA AAAGCTGGGC TGGCCCCTGC TCACTGACGC TCAATCTCAG
CTCAGACAGC ATCCAGGGGT AATAGGAAAT ATCGATCAAC TTCTGCATCA ACCAAAAGCC
AAGGCACTGC TGATGCAAGC TGAGCGGGTA CTTGTTATTG GCGGTCGTTT GCTCTCTAAA
CGCCTGATCG ACTATCTGGC CCAAAATAAG TGGAAGAGCT ATTGGCAAGT ATTGCCGCGG
CAGATGAGGT TAGACCCCAG CCATAGCGCC AAACAGATCT GGCATGCCAG TGTTACCAAT
ATCACTTCAC TCTCCTGGCC ACGCTCATCG GAGGCTAACT GGGCGCTTCA GCTTACCCAA
CAAAATGATG AGATGGAGAG ATTATTTGAG CAGCAGATAG ATAACGCTGA GTTTGGAGAG
GCCATGGTGG TTCGCGCCAT CGCGAAATCA CAAACCAAGC AGCAACAGCT ATTTATTGGT
AACAGCCTCC CAGTCAGGCT CTACGATATG TTTGCACCAA TCACCACAGA GCAGGGAGCA
ACTTTTACCA ATCGCGGCGC ATCTGGCATC GATGGGCTAC TGGCGAGTGC TTGCGGCGTT
GCCATGCATC AAGGCAGGGC CACGACTCTG ATCATTGGTG ATATCTCCCA GCTACACGAT
CTAAACTCAC TAGCTATTGC CAGCCACTGC TCAAGCCCGC TGGTGATCGT TATCCTAAAC
AATGACGGCG GCAATATTTT TAATCTACTG CCTGTACCTG ATGAGAAGCT TAGAAGCGAT
TACTATCGAC TCGCCCATGG GTTCGAGTTT GGCTATGGTG CGGCTATGTT TGGTATTCCC
TATAACAGAG TGGAGGAGTT AGAGAGCTTT GAAGAGTCAT ATCAAGATGC TATCCACTAT
GAAGGCGCCT CAGTGATTGA AGTCATCGTC CCACAGCAGC AAGCGAGCGA TCAGATCGCC
CGAATTGCCA GCTGGATAAA ACAGAGCTGA
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| Protein sequence | MQIEKTAELN LLWGTLILEE LSRLGVQHIC MAPGSRSTPL TLAAAKQSKL KQHLHFDERG
LGFMALGLAK ASQAPVAVVT TSGTAVANLY PAVIEAWLTH VPLIVLSGDR PPELIDCGAN
QAIIQPAIFA QYAKQINLST PDLAIRPEAL LTLLDEAISN QSQPLHINCM YREPLYPSTM
SANFTQYLST LGNWQHTNHA YNQYGKPNLS SLPSSDAMAR FVHGKGVIIA GTLTPDCDPQ
ALVALSQKLG WPLLTDAQSQ LRQHPGVIGN IDQLLHQPKA KALLMQAERV LVIGGRLLSK
RLIDYLAQNK WKSYWQVLPR QMRLDPSHSA KQIWHASVTN ITSLSWPRSS EANWALQLTQ
QNDEMERLFE QQIDNAEFGE AMVVRAIAKS QTKQQQLFIG NSLPVRLYDM FAPITTEQGA
TFTNRGASGI DGLLASACGV AMHQGRATTL IIGDISQLHD LNSLAIASHC SSPLVIVILN
NDGGNIFNLL PVPDEKLRSD YYRLAHGFEF GYGAAMFGIP YNRVEELESF EESYQDAIHY
EGASVIEVIV PQQQASDQIA RIASWIKQS
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