| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0177 |
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| Symbol | |
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| ID | 6114400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 213396 |
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| End bp | 215018 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631658 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001758573 |
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| Protein GI | 170724547 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGTA CAACACACGA TGCACAAGAC AATATAGAGC CAGAACATAA TCAAGCAGAT
CACCATGACG ACCATCATGA AGCGATGCCG ACTGGGATTA AACGCTGGCT TTTCACTACA
AACCACAAAG ATATAGGCAC GCTCTATCTC TGGTTCAGCT TCATCATGTT CCTCACTGGT
GGCGCGATGG CCATGGTTAT TCGAGCCGAA CTTTTTCAGC CCGGACTCCA GCTTGTTGAG
CCAAACTTTT TTAATCAGAT GACCACAGTT CATGGTCTTA TCATGGTATT CGGGGCCGTA
ATGCCAGCCT TCACAGGATT AGCTAACTGG CTAATTCCCA TGATGATTGG CGCGCCGGAT
ATGGCACTCC CAAGAATGAA CAACTGGAGC TTCTGGATCT TACCTTTCGC TTTCGCCATC
TTGCTGAGCT CTCTATTTAT GGAAGGTGGT GGTCCCAACT TTGGTTGGAC CTTCTACGCT
CCCCTATCCA CAACTTATAG CCCAGACAGC ACTGCACTCT TCGTCTTTGC AGTGCATATT
ATGGGAATTA GCTCCATCAT GGGTGCTATT AACGTTGTGG TGACAATCGT CAACATGCGT
GCACCTGGTA TGACGTGGAT GAAGCTTCCT CTGTTTGTGT GGACTTGGCT TATCACAGCT
TTCCTATTGA TTGCGGTGAT GCCAGTTCTT GCAGGTACTG TGACCATGGT ATTGACCGAT
AAATACTTCG GCACTAGCTT CTTCGATGCA GCAGGTGGTG GAGATCCTGT GATGTTCCAG
CATATCTTCT GGTTCTTTGG ACATCCGGAA GTGTACATCA TGATTTTACC CTCTTTCGGT
ATCATCTCAG CCATTGTGCC AGCCTTCAGT CGAAAACCTC TGTTTGGTTA CTCCTCCATG
GTTTACGCAA CCGCCAGTAT CGCAATACTT TCATTCCTAG TATGGGCACA CCATATGTTC
ACAACGGGTA TGCCTGTTTT TGCAGAGCTC TTCTTTATGT ACTGTACTAT GCTGATCGCG
GTGCCTACAG GGGTGAAAGT GTTCAACTGG GTCGCAACCA TGTGGCGGGG ATCAATCTCC
TTTGAAACCC CGATGTTGTT TGCTGTCGCC TTTATTATTC TCTTTACCAT TGGAGGATTT
TCTGGATTGA TGTTGGCGAT CACCCCTGTT GATTTCCAAT ACCACGATAC CTATTTCGTG
GTTGCCCATT TCCACTATGT GTTAGTCACA GGCGCTATAT TCTCAATCAT GGCAGCCGCC
TATTACTGGC TACCTAAGTG GACAGGCAAT ATGTACGATG AAAAGTGGGG CAAGATCCAT
TTCTGGACCT CTGTCATCTC GGTCAATGTG CTGTTCTTCC CGATGCATTT CTTAGGCTTA
GCAGGTATGC CAAGGCGGAT CCCTGATTAC GCGGTGCAGT TTGCTGATGT AAACCAGATA
GTTTCAATTG GCGGTTTCGC CTTTGGTTTA TCTCAACTAA TCTTCCTGTA TGTGGTCATC
AAGTGCATAC GCAGCGGTGA AAAAGCTGAG GCAAAACCAT GGGATGGCGC CGAAGGTTTA
GAGTGGACTC TACCAAGTCC TGCTCCATAC CACTCCTTTA GTACGCCGCC GGAGATTAAA
TAA
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| Protein sequence | MTSTTHDAQD NIEPEHNQAD HHDDHHEAMP TGIKRWLFTT NHKDIGTLYL WFSFIMFLTG
GAMAMVIRAE LFQPGLQLVE PNFFNQMTTV HGLIMVFGAV MPAFTGLANW LIPMMIGAPD
MALPRMNNWS FWILPFAFAI LLSSLFMEGG GPNFGWTFYA PLSTTYSPDS TALFVFAVHI
MGISSIMGAI NVVVTIVNMR APGMTWMKLP LFVWTWLITA FLLIAVMPVL AGTVTMVLTD
KYFGTSFFDA AGGGDPVMFQ HIFWFFGHPE VYIMILPSFG IISAIVPAFS RKPLFGYSSM
VYATASIAIL SFLVWAHHMF TTGMPVFAEL FFMYCTMLIA VPTGVKVFNW VATMWRGSIS
FETPMLFAVA FIILFTIGGF SGLMLAITPV DFQYHDTYFV VAHFHYVLVT GAIFSIMAAA
YYWLPKWTGN MYDEKWGKIH FWTSVISVNV LFFPMHFLGL AGMPRRIPDY AVQFADVNQI
VSIGGFAFGL SQLIFLYVVI KCIRSGEKAE AKPWDGAEGL EWTLPSPAPY HSFSTPPEIK
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