Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0171 |
Symbol | |
ID | 6114394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 209150 |
End bp | 210133 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631652 |
Product | cytochrome oxidase assembly |
Protein accession | YP_001758567 |
Protein GI | 170724541 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCC CCTCTCTACT AAAAATAACC ATCATCTTCA CCCTGTGCGT CATATTAATG GGGGCTTATA CCCGACTATC TGATGCCGGT CTCGGGTGTC CCGACTGGCC AGGATGTTAT GGCATGTTGA AAGTGCCGAG CCAAGCTCAT GAACTATCTC AAGTGCAAGC GACTTTTCCT GGCCATGAGG TAGAGCCCAA AAAAGCTTGG TTAGAGATGA TACATAGGTA TATCGCTGGC GCTCTTGGTT TATTGGTACT ACTAATCTTT ATTCTTTGTT TGAAAAAAGA TGAAGCCCCT AAAAAATTAC CAGGATTGAT CGCCCTATTG ATCGTGTTCC AAGCAGCCCT AGGCATGTGG ACAGTCACAA TGAAGCTCAT GCCTGTCGTG GTGATGTCCC ACCTTATTGG AGGATTTAGC TTAATAGCCT TACTGCTGCT ACTGTATTTG CGAACTAAAC CATTGAGGAT CCCCGGAGGA GACGCCATTG CTCGTAAACT TGCTCCTCTC GCATTAATTT GCTTAGGCGT ATTAATTTTA CAGATCATTA TTGGAGGCTG GACCTCCTCA AACTATGCGG CCCTTGCTTG CACAACCTTA CCTATTTGTG AAGGTGACTG GTATAACAAC CTGAAACTCG CTCAAGCTTT TAACCCTTTT CAGGGAGAGC ATGATACCTA TGAGTTTGGC GTATTAGATT ATGCTTCGAG GATGACAATA CATGTTGTTC ACCGATTTTG GGCAGTAGTC ACCGCTGCGA TGCTATTTTG GTTAGCTTTT AAGTTATATC AACAATCTCA ATCTTCACTA CTGAAGCGTT CCGCTTTACT GCTGGTTTTA CTCGTGTGCT TACAGGTTGC GTTAGGAATA AGCAATGTCG TGCTTCACCT GCCTTTAGGT GTTGCAGTTT CCCATAATGC CGGCGCAGCT TTACTACTAC TTAACTTAGT CTTTATTAAT TACGCACTGT GGCGAAAAGC ATAA
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Protein sequence | MQIPSLLKIT IIFTLCVILM GAYTRLSDAG LGCPDWPGCY GMLKVPSQAH ELSQVQATFP GHEVEPKKAW LEMIHRYIAG ALGLLVLLIF ILCLKKDEAP KKLPGLIALL IVFQAALGMW TVTMKLMPVV VMSHLIGGFS LIALLLLLYL RTKPLRIPGG DAIARKLAPL ALICLGVLIL QIIIGGWTSS NYAALACTTL PICEGDWYNN LKLAQAFNPF QGEHDTYEFG VLDYASRMTI HVVHRFWAVV TAAMLFWLAF KLYQQSQSSL LKRSALLLVL LVCLQVALGI SNVVLHLPLG VAVSHNAGAA LLLLNLVFIN YALWRKA
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