| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0160 |
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| Symbol | |
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| ID | 6114383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 196145 |
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| End bp | 197479 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631641 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001758556 |
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| Protein GI | 170724530 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTG TTGAACTTCT CTTAAACAGA CAGAAAAACA AACAGTTATT GGCACTCGCT
CTGCCCATGA TATTGTCCAA TATCACAGTC CCTTTACTTG GGCTTGTGGA CACAGCTGTA
GTGGGTCATT TAAGTAATGC CTACTATCTA GGCGGTGTAG CTGTTGGCTC AACTATCATC
ACACTTATAT TGTGGATGCT AGGCTTTTTA AGGATGGCTA CAACAGGCTT AGTCGCGCAA
TCCTTTGGGG CGGGAGACAC ACAAACCCAA TACAAATTGT TACTTCAAGC GGGAAGTTTA
GCGCTTATTT TAGGTGTAAC TGCGGTAGTA CTGCAACTCC CCATTCTCAA TGGCGCATTA
TCACTCACAG ATGCCAGTGC TGAGGTCGAA CGCTATTGCC GCGAGTATTT CAGTATCAGG
ATCTGGTCAA CCCCATTTGC ACTGCTCAAT CTGGTTCTTT TGGGCTGGTT ACTTGGCAGG
CAACAACCTA GAGCCGCAAT GTGGCAACTC ATTGTCGCTA ACTTAGCCAA TATAGGGCTC
GATGTTCTAT TCGTTCTAGG TTTAGGCTGG GGAGTCAAAG GTGCTGCACT CGCTTCAGTT
TTTGCCGATA TGGCTGGTTT CCTTGTCGCC TTTACCATGG TTTATAAAGA GCTAAATAAA
ATAGGAAACT TCAAATTTTT AGCGCTATGT AAAGAGCTGA ACATCAGCAG TTATCACAAA
CTACTTACCC TTAATGCTGA TATATTTATT CGCAGCTTAT GTTTGCAACT ATCTTTTGCC
TTTATGACAT TTCAAGGCGC AGGATTAGGA GATAAAACCG TTGCAGCAAA CGCTGTGTTA
CTGAATCTAT TACTGCTTAT CTCCTACGCG TTAGATGGTA TTGCTTATTA TGCTGAAGCG
GAAGTTGGCC GCGCTTATGG CCAGAAAAAC AGAAAGTTAA TGCAAGAGAG TGTCACTTTA
GCCTGGCTCT GGTCTGGAAT TTCCGCGGTC TTATTCACGC TACTTTTCGC CTTTGGAGGA
GAGAGTATCA TCAGGCTACT AACCAGTATC GAAGATGTGA GATTAGTCGC TAGTGAGTTT
CTTTTCTGGG TGGTACTGCT TCCGCTACTC TCATTTGGCT CCTATCTTTT TGATGGTGTA
TATATTGGGG CCGCTAAGGG CAAGGTCATG AGAAACAGCA TGATAATATC CACATTCGGG
ATATTTTTCC CCGTATGGTT TCTGCTGCAA GATAACGGCA ATCACGCCCT ATGGGCAGCC
ATGAGCGCGT TTATGTTGGC AAGAAGTCTA ACGCTAACAC TCCACTATCG ATACCGCTTA
AGTAAAGTTA TCTAA
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| Protein sequence | MTPVELLLNR QKNKQLLALA LPMILSNITV PLLGLVDTAV VGHLSNAYYL GGVAVGSTII
TLILWMLGFL RMATTGLVAQ SFGAGDTQTQ YKLLLQAGSL ALILGVTAVV LQLPILNGAL
SLTDASAEVE RYCREYFSIR IWSTPFALLN LVLLGWLLGR QQPRAAMWQL IVANLANIGL
DVLFVLGLGW GVKGAALASV FADMAGFLVA FTMVYKELNK IGNFKFLALC KELNISSYHK
LLTLNADIFI RSLCLQLSFA FMTFQGAGLG DKTVAANAVL LNLLLLISYA LDGIAYYAEA
EVGRAYGQKN RKLMQESVTL AWLWSGISAV LFTLLFAFGG ESIIRLLTSI EDVRLVASEF
LFWVVLLPLL SFGSYLFDGV YIGAAKGKVM RNSMIISTFG IFFPVWFLLQ DNGNHALWAA
MSAFMLARSL TLTLHYRYRL SKVI
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