| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0139 |
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| Symbol | |
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| ID | 6114362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 171761 |
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| End bp | 172660 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631620 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001758535 |
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| Protein GI | 170724509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAG CAAGTAGAGA AGTAAGCTTG TTTAGAGGGA TGCAGATACT CTTTGTTTTT
CTAGTCACCC CACATGCTCT CTCTACACAA GCTGCAGATA AGCCTCACTA TAAAGCGAGC
CGCTCAGAAA GCGGTCTGGT TGTGACAGGG CAAGTTAATG AGCTAGCCTC AGAGCCTGTT
GGCGTTAAAA TGTTAGATAA CAGCAGTGCT CAGACTATCA ACAGCTCCTC AACTTCTCTT
AATCGCTCAA CAGTGCCCCC CAAGCCTGTA AAGAGAGCTC AAGCTGCATC ATCACGCCAT
GTGCTGGATA ACTCAAGTGC AGGAAAGCAG TACCGCTTAG AGACGACTTT AGATGACCGC
GTAAAAGTTT ATCAGTATCA GGATGAGAAT GGTGTGGCCG TGTTTACCGA CCACGCCCCA
GGTGCGAGCG AGTATCAAGT TATCCTTTAC GATTGCTACG CCTGTCGACC GGATTCAGAT
CTTGATTGGA AAAAGATGCC GCTTTATTCG AAACGCTTCG ATGATCTAAT TCAACTTGCG
GCGAGAAACC ATCAACTTGA ACCCGCTTTG ATCCGTGCAG TTATCCATGC TGAGTCTGCC
TTTAATGTCT ATGCCATCTC AAAAACTGGT GCTATGGGCT TGATGCAGCT AATGCCGGAA
ACTGCCAAGG AGCTTGGGGT TAAAAATGCT TTTAAACCTG CGCAAAATAT CGATGGTGGA
GCTCGATATT TAGCTAAGAT GCTTAAACGC TTTGGTGGCG ATATCGAGCT TGCCTGCGCT
GCTTATAACG CAGGCCCAAC AAGGGTCACC GAACATAAAG GGATCCCACC ATACCCTGAG
ACCATAGCGT ATGTTGAGCG AGTAAAAATA CTGCTAAAGC GTTATCAAAG CTTAGGGTGA
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| Protein sequence | MILASREVSL FRGMQILFVF LVTPHALSTQ AADKPHYKAS RSESGLVVTG QVNELASEPV
GVKMLDNSSA QTINSSSTSL NRSTVPPKPV KRAQAASSRH VLDNSSAGKQ YRLETTLDDR
VKVYQYQDEN GVAVFTDHAP GASEYQVILY DCYACRPDSD LDWKKMPLYS KRFDDLIQLA
ARNHQLEPAL IRAVIHAESA FNVYAISKTG AMGLMQLMPE TAKELGVKNA FKPAQNIDGG
ARYLAKMLKR FGGDIELACA AYNAGPTRVT EHKGIPPYPE TIAYVERVKI LLKRYQSLG
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