| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0138 |
|---|
| Symbol | |
|---|
| ID | 6114361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 170750 |
|---|
| End bp | 171760 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641631619 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001758534 |
|---|
| Protein GI | 170724508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTG TTAGTTTTAT TTTTGGGGCG CCGATTAAGC CTAAACGTCA GTCTAAACCT
CTCGTTGCTG TCGGCGATGA ATTAACCTCT CTACAGGCTC ACTATGATGA GCATATTGAG
CCATTAACCC GTAAGTTTGA AAACCGTCGT GTTGCTAGTT TAAAAGCTCT TAGACAGCGA
CTGTATATGA GCTTGGCTAT ATTTGCCGGT GTTCTTATTA TTTCGGTGCT TATCGATAAT
CAACAGAGAT TAGGGCTTCC TTGGCCGTTT TTTCTTCTTC CTCTTATCCC CTTAATCTGG
TGGTCCTCAC GACCCGTTTC ACGTTATAAA TCCGATGTAA AACAGCGAGT CTTCCCTAAG
ATTTTTCGCT ATTTTGGTGA TGATTTTATC TTTAGCTCTA CTCACCAAAT GAGCCTCTCG
GCGTTAAAGC GCTCTAAGCT ACTCCCCAGT TATGATAATG CGAGTTTTGA GGATTATGTT
CAGGGAACTT ATAAGGGGGT AGAGATAGCT ATTAATGAGC TTGAGCTAAC TAAAGAGGTG
AAGCGTGATA AACGTCGTGA GACACAAACT GTATTCAATG GGGTGATGGT GCAGTTGAGC
TGTCATAAGC CTTTTACTGG CCATACTGTG GTAGTAAAAA CTCGAGGAGG ATTAATCAAC
TTCCTTTCAG ATTCTTTTAA AAGCCTCTCT CGAGTAAAAC TTGAAGATGT GAGGTTTGAG
AAACAGTTTG ATGTGTTCTC TTCGGATCAA ATTGAAGCAA GGTATCTGTT AACTGTGACC
TTTATGGAGC GGCTTCAGGA GCTGGCTAGT TGCTTCAGTG GCAAGATACA GTGCGCATTT
TATGATGATA AGTTACTTAT CATGTTGGCA AGCAGTGAGG ATAGATTTGA GTTGGGGTCC
ATCTTCCATG GTGCCACCTT TGAGTATGAG TTCAGTCAGA TTAACAAAGA GATGCGTCAG
TTATTTGCTA TGATTGAAGT ACTCAAACTC GATGAATATA CGGGCCTATA G
|
|---|
| Protein sequence | MNIVSFIFGA PIKPKRQSKP LVAVGDELTS LQAHYDEHIE PLTRKFENRR VASLKALRQR
LYMSLAIFAG VLIISVLIDN QQRLGLPWPF FLLPLIPLIW WSSRPVSRYK SDVKQRVFPK
IFRYFGDDFI FSSTHQMSLS ALKRSKLLPS YDNASFEDYV QGTYKGVEIA INELELTKEV
KRDKRRETQT VFNGVMVQLS CHKPFTGHTV VVKTRGGLIN FLSDSFKSLS RVKLEDVRFE
KQFDVFSSDQ IEARYLLTVT FMERLQELAS CFSGKIQCAF YDDKLLIMLA SSEDRFELGS
IFHGATFEYE FSQINKEMRQ LFAMIEVLKL DEYTGL
|
|---|
| |