| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0134 |
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| Symbol | |
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| ID | 6114357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 163636 |
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| End bp | 165252 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631615 |
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| Product | AbgT putative transporter |
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| Protein accession | YP_001758530 |
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| Protein GI | 170724504 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.722786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGA ATAAAGATGA GAGCTTGCCG CAAGATCTCA ACTCTTCAGG GTCTCCTGAG
AAACAAAGTG GCGCATTTGT CCGCTTTTTG AATATTGTCG AACGTCTAGG TAATTTACTT
CCCCACCCCA TTACACTCTT TGCCATCTTC TGTATGGCCG TAATCGTGAT CAGCGGTATT
GCTGGTTATT TTGAGCTTAC CGTGACAGAT CCAAGACCTG TTGGCGCCTC TGGCCGCAGC
GAAGATGGTC TTATCCACGT CGTCAGCTTA ATGAACGCCG AAGGCTTGAG AATGATAGTC
TCAAACCTTG TCACCAACTT CACCGGATTT ACTCCACTTG GTACCGTACT AGTAGCACTC
TTAGGTGTCG GCATTGCTGA GCGCTCTGGC ATGCTCTCGG CTGCCATGCG TTTACTCGTG
ATGGGCGCAT CTAAACGCCT TGTTACCTTA ACCTTAGTTT TCGCAGGTAT CGTATCGAAC
ACCGCCTCAG AGCTTGGCTA TGTGGTGCTT ATCCCAATGG CAGCCTTGAT ATTTCACTCC
CTTGGTCGTC ATCCCTTGGC AGGTCTAGCG GCCGCCTTCG CCGGTGTCTC CGGTGGCTAC
AGCGCAAATT TACTGCTAGG TACTGTCGAT CCTCTACTCT CGGGGATCAC TGAAGCAGCA
GCCCAGATGA TTGACCCTGA CTATATCGTT GGTCCAGAGG TGAACTGGTA CTTTATGTTT
GTTTCGACCT TCCTTATCAC AGGTTTGGGC GCCTTAGTCA CAGAGAAGAT TGTCGAGCCT
AAACTTGGAA AGTACGATCC AAGTGAGGCC AATATTGATC TGTCTAATCA ATCGATGGAC
AGCGTCACCA CGCTAGAGAA AAAGGGACTA AAAGCAGCAG GTATCGCCAC TTTGATCCTC
TCAGTATTAG TTGCACTCAC CGTAGTACCT GAGAGTGGCC CGCTTAGAGA CCCAGAAACA
GGACTCGTTG CAGGCTCACC TTTCCTTAAA GGGATCGTCG CCTTTATCTT TATCTGTTTT
GCGATCCCAG GCCTTGTTTA CGGTAAAGTC GTCGGCACCA TGAAACGTGA TAAAGATGTA
ATTGATGCCA TGTCTAACAG CATGAGCTCA ATGGGCATGT ATATTGTCCT GGTCTTTTTT
GCCTCTCAGT TCGTTGCCTT CTTTAAATGG ACCAACTTAG GTGCAGTGCT TGCGGTATCT
GGCGCCGATG CCCTAAACGC TATCGGCCTA ACAGGCCCGC TAGTATTTGT ACTGTTTATT
ATGATGTGTG GGTTTATCAA CCTTATGCTC GGCAGTGCAT CGGCTCAGTG GGCTGTAACG
GCACCGATTT TCGTCCCCAT GTTGATGCTG GTTGGTTACG CACCTGAAAC CATTCAGGCG
GCTTATCGTA TTGGAGATTC AGTGACTAAC CTTATCACCC CCATGATGAG TTATTTTGGA
CTGATCTTAG CGGTTGCTTC GCAGTATAAG AAGAACTTAG GAATAGGTAC GCTAATCGCA
ACCATGCTGC CCTACTCAAT CGTCTTCTTT ATCGGTTGGA CCTGCTTCTT CTTCCTGTGG
GTATTCGTAC TTGGTTTCCC TGTAGGCCCA GGTGCTGCCA CCTACTACAC GCCATAG
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| Protein sequence | MGLNKDESLP QDLNSSGSPE KQSGAFVRFL NIVERLGNLL PHPITLFAIF CMAVIVISGI
AGYFELTVTD PRPVGASGRS EDGLIHVVSL MNAEGLRMIV SNLVTNFTGF TPLGTVLVAL
LGVGIAERSG MLSAAMRLLV MGASKRLVTL TLVFAGIVSN TASELGYVVL IPMAALIFHS
LGRHPLAGLA AAFAGVSGGY SANLLLGTVD PLLSGITEAA AQMIDPDYIV GPEVNWYFMF
VSTFLITGLG ALVTEKIVEP KLGKYDPSEA NIDLSNQSMD SVTTLEKKGL KAAGIATLIL
SVLVALTVVP ESGPLRDPET GLVAGSPFLK GIVAFIFICF AIPGLVYGKV VGTMKRDKDV
IDAMSNSMSS MGMYIVLVFF ASQFVAFFKW TNLGAVLAVS GADALNAIGL TGPLVFVLFI
MMCGFINLML GSASAQWAVT APIFVPMLML VGYAPETIQA AYRIGDSVTN LITPMMSYFG
LILAVASQYK KNLGIGTLIA TMLPYSIVFF IGWTCFFFLW VFVLGFPVGP GAATYYTP
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