Gene Swoo_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0117 
Symbol 
ID6114340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp141184 
End bp143493 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content43% 
IMG OID641631598 
ProductMORN repeat-containing protein 
Protein accessionYP_001758513 
Protein GI170724487 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTT ACCAATCCAT AATCGCAAGC CTCATCATGG TTAGCGTAAC ACTAATCAGT 
TTACCTGCAT CAGCAACACA AAATATCTCC TCCGCCATGA TAGAGGTTCG TCAGCAAGAC
GGAGTTGGTT TTTATTACAA CATAGCCAAT GGTATGGCAC TGAATGGCGA TATCTCTATC
GTCAGGGATA ACCAAGGCTA TACCTTAGGG CAATTCTCAC AGGGGCTTCC AAACGGTCAA
TGGCAAGTCT TTCTCCCCAA CAATCAAAAG CTGGTCGATG GCCTGTACCT CAATGGCTAC
CAAGATGGTA AGTGGCAGCT GTTTGATATG AGTGGTGGCA TAAATGAAAT TCAGCACTAT
ATCAAAGGTG TGCCCACTGG CCGCTGGGAG CAATATAATC GTCAAGGCTC TATCTATCAA
ACCACGGATT ATAAAGAGGG CCAAAAGTCC CTTGTAAAAC GATTTTTCAA TAGCGGCAAA
TTACAGGCTA AAGAGAGCTA TTTAGATAAT CTTCGACATG GTTTATGGGA GAGTTACCAT
GAAAATGGCA CATTGGCGCT CAGTCAGCAA TATGCTAATA ACCAAGTATC AGGCCCCTAT
CTAGAACAAA ATAACCAAGG GCAAACCTTA GTCAAAGGTC AATACAATGC TGACGGACAA
CGCCAAGGAA AATGGCTGAG ATCCTATGAT GATGGCACGC CTGAAAGTGA AACCCACTAT
GAGGCAGATA GCCGTAATGG CAATGCTCTT GAATATCATC CCAATGGTCA GGTCTCAATT
CAATCACACT ATCAAAACGA TCTACGCCAA GGAGAGTTAC TGCGTTACAG TGACAATGGA
ACCTTGTTGG AGAAAGAGCA ATACAAAAAT GGGCTATTAG ATGGTGCTCA GTCCTACTAC
AACCTTTCTG GTGTATTGAT CATTGAGCAG AACTATAAAG AGGGCAAACA AGCTGGCACT
CAAAAAACCT ATTTTGATAA TGGTGAGCTA AAAAAAGTCA CCAACTATCA CACTTCAAAC
TTAACTGATA ACGACCAATA TCCACTTCAG GGAATACAAG AAACCTATGA CTCAGAGGGC
CGGTTAATCT CAAAAGGCTA TTATGAGATG GGGCTAAAAC AGGGAAAGTT TGAGCGTTAT
CGGCAGGGGG TTATCCATAA ACGGGAACAG TGGCATGCAG GTGAACGTCA TGGGGACCAA
ATCGTCTACT ATGATAAAGA TACGGTACGT AGCCTAAATC AGTATAAGCA GGGAAAACAA
ACTGGAACTG CTGAGAGCTA CTTTGAAGAC GGCACTCTAA AGGAGCGTGG AACCCGAATT
GATGGCAAGT GGGCAGGTAA ATATGAATCA TTTTACGATA CAGGCTCTCC ACGAGAGCTT
ATTCACTACG CCACAGAAAA AAGCGACTCA AATTATCGTT TCCCATACCA CGGCAACTAT
GCCCGTTGGT ACGCAAATGG CGATCCCAAT GATGAAGGTA AATACCTTAA CGGTGAAAAA
GAGGGTCTTT GGCTTCATTA TCAACAAGGA CTAGTCAGCC GCAAGCAAAC CTTTAAAGAG
GGCAAGCTTA ATGGCGATTA TGCTGAATAC TATAACGGCC GCAGACGCGT CACAGGGCAG
TATTTAGATA ATCAAAGAGA TGGACTATGG ACAGACTATC GCTATCAAGA GAGCGATCCC
ACCTTTGGTA CCATCCCTGA GGGCAATATC TATCGTACCA GTCAATATCA ACAGAATAAG
CTAAATGGCC TTCGCGAATA CTTCAGCTTT AAAAAAATAC GCTATCGCAG TGAAACCTAT
AAAAATGGTG AGCAAACAGG TCCCTACGCT GAGTATTACG TCGACAACGG TCAAGTAAAG
CGTCAAGGAG AGATGCTTGA AGGAAAGCAG ATTGGCCATT GGGAGCTTTG GTTTGAAGAT
GGCATGCAGT CCTTAAGTGT TGAGTTTCTT GATGGAAAAC AACATGGAAA GCAACTTGAG
TACTACAGCA ATGGTCAGCT AAAGCAGCAA GCACATTATG CAAAAGGTAA ACTAGATGGC
GAGCTTATTC ATTACTTTCA AACAGGTAAG AAAAAGTATC AAGAGCAGTG GCTCAAAGGG
CAAAAGGAGG GAGAAGCCAG CTACTTCCAC CCTAACGGTA AGTTATCTGA AAAAGGCACC
TATTTAAGAG AGAGAAAAGA GGGATTATGG CAAAGTTACT GGCCCAATGG CGAGAAACGC
AGCGAAGGCA GCTACATTAG CAATCGACAA TCTGGTGACT GGGTCTACTA TGATCAATTC
GGTAAGCTCA TTAAAACGGA GCATCACTAA
 
Protein sequence
MHFYQSIIAS LIMVSVTLIS LPASATQNIS SAMIEVRQQD GVGFYYNIAN GMALNGDISI 
VRDNQGYTLG QFSQGLPNGQ WQVFLPNNQK LVDGLYLNGY QDGKWQLFDM SGGINEIQHY
IKGVPTGRWE QYNRQGSIYQ TTDYKEGQKS LVKRFFNSGK LQAKESYLDN LRHGLWESYH
ENGTLALSQQ YANNQVSGPY LEQNNQGQTL VKGQYNADGQ RQGKWLRSYD DGTPESETHY
EADSRNGNAL EYHPNGQVSI QSHYQNDLRQ GELLRYSDNG TLLEKEQYKN GLLDGAQSYY
NLSGVLIIEQ NYKEGKQAGT QKTYFDNGEL KKVTNYHTSN LTDNDQYPLQ GIQETYDSEG
RLISKGYYEM GLKQGKFERY RQGVIHKREQ WHAGERHGDQ IVYYDKDTVR SLNQYKQGKQ
TGTAESYFED GTLKERGTRI DGKWAGKYES FYDTGSPREL IHYATEKSDS NYRFPYHGNY
ARWYANGDPN DEGKYLNGEK EGLWLHYQQG LVSRKQTFKE GKLNGDYAEY YNGRRRVTGQ
YLDNQRDGLW TDYRYQESDP TFGTIPEGNI YRTSQYQQNK LNGLREYFSF KKIRYRSETY
KNGEQTGPYA EYYVDNGQVK RQGEMLEGKQ IGHWELWFED GMQSLSVEFL DGKQHGKQLE
YYSNGQLKQQ AHYAKGKLDG ELIHYFQTGK KKYQEQWLKG QKEGEASYFH PNGKLSEKGT
YLRERKEGLW QSYWPNGEKR SEGSYISNRQ SGDWVYYDQF GKLIKTEHH