Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0117 |
Symbol | |
ID | 6114340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 141184 |
End bp | 143493 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631598 |
Product | MORN repeat-containing protein |
Protein accession | YP_001758513 |
Protein GI | 170724487 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTTTT ACCAATCCAT AATCGCAAGC CTCATCATGG TTAGCGTAAC ACTAATCAGT TTACCTGCAT CAGCAACACA AAATATCTCC TCCGCCATGA TAGAGGTTCG TCAGCAAGAC GGAGTTGGTT TTTATTACAA CATAGCCAAT GGTATGGCAC TGAATGGCGA TATCTCTATC GTCAGGGATA ACCAAGGCTA TACCTTAGGG CAATTCTCAC AGGGGCTTCC AAACGGTCAA TGGCAAGTCT TTCTCCCCAA CAATCAAAAG CTGGTCGATG GCCTGTACCT CAATGGCTAC CAAGATGGTA AGTGGCAGCT GTTTGATATG AGTGGTGGCA TAAATGAAAT TCAGCACTAT ATCAAAGGTG TGCCCACTGG CCGCTGGGAG CAATATAATC GTCAAGGCTC TATCTATCAA ACCACGGATT ATAAAGAGGG CCAAAAGTCC CTTGTAAAAC GATTTTTCAA TAGCGGCAAA TTACAGGCTA AAGAGAGCTA TTTAGATAAT CTTCGACATG GTTTATGGGA GAGTTACCAT GAAAATGGCA CATTGGCGCT CAGTCAGCAA TATGCTAATA ACCAAGTATC AGGCCCCTAT CTAGAACAAA ATAACCAAGG GCAAACCTTA GTCAAAGGTC AATACAATGC TGACGGACAA CGCCAAGGAA AATGGCTGAG ATCCTATGAT GATGGCACGC CTGAAAGTGA AACCCACTAT GAGGCAGATA GCCGTAATGG CAATGCTCTT GAATATCATC CCAATGGTCA GGTCTCAATT CAATCACACT ATCAAAACGA TCTACGCCAA GGAGAGTTAC TGCGTTACAG TGACAATGGA ACCTTGTTGG AGAAAGAGCA ATACAAAAAT GGGCTATTAG ATGGTGCTCA GTCCTACTAC AACCTTTCTG GTGTATTGAT CATTGAGCAG AACTATAAAG AGGGCAAACA AGCTGGCACT CAAAAAACCT ATTTTGATAA TGGTGAGCTA AAAAAAGTCA CCAACTATCA CACTTCAAAC TTAACTGATA ACGACCAATA TCCACTTCAG GGAATACAAG AAACCTATGA CTCAGAGGGC CGGTTAATCT CAAAAGGCTA TTATGAGATG GGGCTAAAAC AGGGAAAGTT TGAGCGTTAT CGGCAGGGGG TTATCCATAA ACGGGAACAG TGGCATGCAG GTGAACGTCA TGGGGACCAA ATCGTCTACT ATGATAAAGA TACGGTACGT AGCCTAAATC AGTATAAGCA GGGAAAACAA ACTGGAACTG CTGAGAGCTA CTTTGAAGAC GGCACTCTAA AGGAGCGTGG AACCCGAATT GATGGCAAGT GGGCAGGTAA ATATGAATCA TTTTACGATA CAGGCTCTCC ACGAGAGCTT ATTCACTACG CCACAGAAAA AAGCGACTCA AATTATCGTT TCCCATACCA CGGCAACTAT GCCCGTTGGT ACGCAAATGG CGATCCCAAT GATGAAGGTA AATACCTTAA CGGTGAAAAA GAGGGTCTTT GGCTTCATTA TCAACAAGGA CTAGTCAGCC GCAAGCAAAC CTTTAAAGAG GGCAAGCTTA ATGGCGATTA TGCTGAATAC TATAACGGCC GCAGACGCGT CACAGGGCAG TATTTAGATA ATCAAAGAGA TGGACTATGG ACAGACTATC GCTATCAAGA GAGCGATCCC ACCTTTGGTA CCATCCCTGA GGGCAATATC TATCGTACCA GTCAATATCA ACAGAATAAG CTAAATGGCC TTCGCGAATA CTTCAGCTTT AAAAAAATAC GCTATCGCAG TGAAACCTAT AAAAATGGTG AGCAAACAGG TCCCTACGCT GAGTATTACG TCGACAACGG TCAAGTAAAG CGTCAAGGAG AGATGCTTGA AGGAAAGCAG ATTGGCCATT GGGAGCTTTG GTTTGAAGAT GGCATGCAGT CCTTAAGTGT TGAGTTTCTT GATGGAAAAC AACATGGAAA GCAACTTGAG TACTACAGCA ATGGTCAGCT AAAGCAGCAA GCACATTATG CAAAAGGTAA ACTAGATGGC GAGCTTATTC ATTACTTTCA AACAGGTAAG AAAAAGTATC AAGAGCAGTG GCTCAAAGGG CAAAAGGAGG GAGAAGCCAG CTACTTCCAC CCTAACGGTA AGTTATCTGA AAAAGGCACC TATTTAAGAG AGAGAAAAGA GGGATTATGG CAAAGTTACT GGCCCAATGG CGAGAAACGC AGCGAAGGCA GCTACATTAG CAATCGACAA TCTGGTGACT GGGTCTACTA TGATCAATTC GGTAAGCTCA TTAAAACGGA GCATCACTAA
|
Protein sequence | MHFYQSIIAS LIMVSVTLIS LPASATQNIS SAMIEVRQQD GVGFYYNIAN GMALNGDISI VRDNQGYTLG QFSQGLPNGQ WQVFLPNNQK LVDGLYLNGY QDGKWQLFDM SGGINEIQHY IKGVPTGRWE QYNRQGSIYQ TTDYKEGQKS LVKRFFNSGK LQAKESYLDN LRHGLWESYH ENGTLALSQQ YANNQVSGPY LEQNNQGQTL VKGQYNADGQ RQGKWLRSYD DGTPESETHY EADSRNGNAL EYHPNGQVSI QSHYQNDLRQ GELLRYSDNG TLLEKEQYKN GLLDGAQSYY NLSGVLIIEQ NYKEGKQAGT QKTYFDNGEL KKVTNYHTSN LTDNDQYPLQ GIQETYDSEG RLISKGYYEM GLKQGKFERY RQGVIHKREQ WHAGERHGDQ IVYYDKDTVR SLNQYKQGKQ TGTAESYFED GTLKERGTRI DGKWAGKYES FYDTGSPREL IHYATEKSDS NYRFPYHGNY ARWYANGDPN DEGKYLNGEK EGLWLHYQQG LVSRKQTFKE GKLNGDYAEY YNGRRRVTGQ YLDNQRDGLW TDYRYQESDP TFGTIPEGNI YRTSQYQQNK LNGLREYFSF KKIRYRSETY KNGEQTGPYA EYYVDNGQVK RQGEMLEGKQ IGHWELWFED GMQSLSVEFL DGKQHGKQLE YYSNGQLKQQ AHYAKGKLDG ELIHYFQTGK KKYQEQWLKG QKEGEASYFH PNGKLSEKGT YLRERKEGLW QSYWPNGEKR SEGSYISNRQ SGDWVYYDQF GKLIKTEHH
|
| |