Gene Swoo_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0098 
Symbol 
ID6114321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp120489 
End bp121241 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content47% 
IMG OID641631579 
Producthypothetical protein 
Protein accessionYP_001758494 
Protein GI170724468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAC CCCCATTGAA ATCTTGGCTT ATCTGTATTG ATGATACCGA TGATATTGGC 
ACTAAAGGTA CCGGTGAGAT TGCTGAAGAG ATTGCCAATC TGCTTTGTGA TAGCACAAGT
CTGCAACCTT GGGTGACCCG CCATCAGCTA TTTGTACATC CAGATATCCC CTATACCTCT
CACAACAGTG CCATGTGTTT TCGATTGGAG ACTCAGGCGC AGCTTGAGCA GATAAAGCAG
GTAGCGGTGA AGCATCTAGT TGAACAGAGT GCGCCAGCAT CGGATCCTGG TTTAGCGATA
TTAGAGCTCG ACACTGAGTT TGACTCAAAC GCATTGGTTG AGTTTGGTTT GCTGGCCAAA
AAAGAGGTGA TAACTAAACC ACAAGCCTAT GAGTTGGCAG AAAAGTTGGG TGTATCACTC
AGTGAGCATG GTGGTACAGG GCAAGGGGTG ATTGGTGCGT TGGCTGGGTT AGGCTTACGC
CTTTATGGTC AAGATGGCCG GGTGAAGGGG CAAGTTGATC TAGGTCAAGA GGAGTCTGAA
GAGGGGGTTA AGTTAACCGT TGCCGAGGTA CTTAAGCGGA CTGGGCTGGG TAGGGTTATC
AGCATCGAGG GTGAGATCTT AGATGCTTGT GAAATCTTGC ACCTCACTAA GAAGGTAAAA
GCTATCTACT ATCAACATGA GTTTTCCTTG CTGGTTTATC GCCATGAAGG GCGCTGGTGT
AATGCACTGA AAAAACATCT GAAGGCATAT TAA
 
Protein sequence
MNLPPLKSWL ICIDDTDDIG TKGTGEIAEE IANLLCDSTS LQPWVTRHQL FVHPDIPYTS 
HNSAMCFRLE TQAQLEQIKQ VAVKHLVEQS APASDPGLAI LELDTEFDSN ALVEFGLLAK
KEVITKPQAY ELAEKLGVSL SEHGGTGQGV IGALAGLGLR LYGQDGRVKG QVDLGQEESE
EGVKLTVAEV LKRTGLGRVI SIEGEILDAC EILHLTKKVK AIYYQHEFSL LVYRHEGRWC
NALKKHLKAY