Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0093 |
Symbol | |
ID | 6114316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 114092 |
End bp | 115450 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641631574 |
Product | isochorismate synthase |
Protein accession | YP_001758489 |
Protein GI | 170724463 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.229971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGTCT ACTCGTTGTC ACAGGCTATT GCCTCTCTTA CTGACACTTT AAAACAACTC AAATTTCAAA CACAAAGCGA TCCTATCATT CAACTGTCTG TGTCTATTAA GCCTGTTCCA GCCATCGCTT GGCTTGCAGC TCAACCTTGC TACCCAAGGA TCTATTGGAA GGGCAGAGAC ACGGAAGAGG AAGTGGCAGC GATCGGTTGC TGTAAAGATT TCTTCTACGC AGATAATATT GATGATAATC AACTCTCTAT TGAATATCAG AAGCAAAGAG CGCTCTCAAA CAATCAAGAT ATCCGTTATT ACGGTGGCGT TGCTTTCGAT AGAACCACAG AGTGTTGGCC TGAATTTGGC CGTGCCCACT TTGTCCTTCC TCGGGTCGAG CTTAGGCGTC ATGGTAACGA CTACAAGCTG CTGGTAAACC TAAACTGCGA AACGGGTAAC GCCGAATCAG AACGCGATCA GGCCATGACG AGCTTAGCTC AGCTTGCTTC TCCAAAGCCT CTACCACCAC CAAACAAGAT AAATATCTTA AGTCGTAGCG ATCGACCAGA CCGCTACCGC TGGACTGAAC TGGTTAATCA GGTCACTCAT CAAAAGTTTA TCCAAGAGAC CCCTAAGGTT GTGCTCTCCC GTTTAACTCA ACTTGAGATA AATCAACCTG TCGATCCTTG GATGCTACTT GCTTGTTGGC AAGGGCGGAA TAAAAACAGT TTTCAGTTTG GCTTTCAGTT TAGTCCCGAT AGCACCTTTA TCTCCTGTAC TCCGGAGCGG TTATATCGGC GTAGACAAAG AGAGCTATTC ACCGAGGCTC TGGCAGGCAC CACTACCAGA GGTTTGAACC TTGAAGAGGA CAAGGTGCTT GCTCAGACAC TGATGGAAGA TAATAAGAAT AGCCATGAGA ACCGATTGGT CAAAGATCAT ATTGTCGATG CGCTAACACC TCTGAGTAAT TATGTGGGTG CAGAGAGCAT TCCTAAAGTG TTTAAGCTCA GTCACATTCA GCACCTTCAT CGCTCAATTC GTGCGGAGTT AAAGCCTGGG GTTGATGACT TTCAGTTACT TCAAGCGCTA CATCCAACAC CGGCAGTTGG TGGTTTACCC AAAGAGCCTG CCATGAGTTT TATTCGCCAA AGTGAAGGCT ATGCCAGAGG TTGGTATGCG GGGGCATGTG GTTACTTTAA CAAGTACGAG AGTGAATTTG CTGTGGCGAT TCGCAGCGCG CTAATCGAAC CTGGTCGTAT CAACTTGTTT GCTGGAGCAG GCATAGTGTC AGGATCTGAG GCCGACTCTG AGTGGATAGA GCTGGAGAAT AAACTCACCA CCATACTCTC AATTCTTACC GAGCTTTAA
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Protein sequence | MAVYSLSQAI ASLTDTLKQL KFQTQSDPII QLSVSIKPVP AIAWLAAQPC YPRIYWKGRD TEEEVAAIGC CKDFFYADNI DDNQLSIEYQ KQRALSNNQD IRYYGGVAFD RTTECWPEFG RAHFVLPRVE LRRHGNDYKL LVNLNCETGN AESERDQAMT SLAQLASPKP LPPPNKINIL SRSDRPDRYR WTELVNQVTH QKFIQETPKV VLSRLTQLEI NQPVDPWMLL ACWQGRNKNS FQFGFQFSPD STFISCTPER LYRRRQRELF TEALAGTTTR GLNLEEDKVL AQTLMEDNKN SHENRLVKDH IVDALTPLSN YVGAESIPKV FKLSHIQHLH RSIRAELKPG VDDFQLLQAL HPTPAVGGLP KEPAMSFIRQ SEGYARGWYA GACGYFNKYE SEFAVAIRSA LIEPGRINLF AGAGIVSGSE ADSEWIELEN KLTTILSILT EL
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