| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0092 |
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| Symbol | |
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| ID | 6114315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 113367 |
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| End bp | 114047 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631573 |
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| Product | hypothetical protein |
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| Protein accession | YP_001758488 |
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| Protein GI | 170724462 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00199645 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCC CTCAAACCAT ACAGGTCGCG ACTGAGTCTT GGCTTGGTTA CACCAATGAA
GATGGAACTG GATTCTACTT CGATATCTTA AAACATGTTT TTCCACAAAA GGATTGGACG
CTTGAGATAG ACATAGCTCC CTTTTCCAGA GTCAGGTACC TGCTCAATCA TGAACGTGCC
GATATAGCGT TAGGCTTCTA TGTGGGTGAT AAAACGAAGG CGCTATATAG TGAACATGCG
GTTGAGGTTG ATAGTGTCGA TGTTGCGTTA ACACCTGAAA TGGCACAGAT ATGGGAGGGG
GTTAATAGCC TCTCTTTTAA AAAAGTGCAG GCGTTGCTGG CCTATCGCTA CGATGAGTTT
ATTGATGTTC CCATGTATTA CGAGGAGAGC AGCAACTTAT TGGATATGCT TAATCGAGTT
AATCGGGGTC GGATAGATGC GGTACTGGAC TATAAGCCAG CTATGCTAGC GAAAGCTGCA
AAATTGGCTC AGCCCAGACA ATTCGTGATT ATTGAGAATA TATTTCAAGC CGAGATCTAT
TTTGTGTTTG CCCAAAACAG TAAGGGAGCG CTATTAAAAG CTCACTTCGA TATTGAGCTA
CAAAAAATGA TCGACAGTGG TGAGCTAGAT AGACTATTCC AGCAGTATAT GGGTCAGGAG
GCCAGCAGAC TTTTGCGTTA G
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| Protein sequence | MATPQTIQVA TESWLGYTNE DGTGFYFDIL KHVFPQKDWT LEIDIAPFSR VRYLLNHERA
DIALGFYVGD KTKALYSEHA VEVDSVDVAL TPEMAQIWEG VNSLSFKKVQ ALLAYRYDEF
IDVPMYYEES SNLLDMLNRV NRGRIDAVLD YKPAMLAKAA KLAQPRQFVI IENIFQAEIY
FVFAQNSKGA LLKAHFDIEL QKMIDSGELD RLFQQYMGQE ASRLLR
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