Gene Swoo_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0090 
Symbol 
ID6114313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp111663 
End bp112127 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID641631571 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001758486 
Protein GI170724460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000177533 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAG TTGAAATAGT GCAAGCAACC ATAGTCACTC CAGAGTTGTT ACAAAGCCTT 
ATGGAGCTTA ATCAAGCGAT CCCTGAATTT GATAACGCTT ACCCAATGAC AGAGTATCAA
ACACGCCTAT CAGACAAGCC AATGTTGGCA TTGTTTATCA AGGTTGAGGG AGAAGTTGCT
GGGTTTAAAC TGGGATATGA ACGTGATAAT GGCCAGTTCT ACAGCTGGTT GGGCGGGATC
TTACCTGAGT TCAGAGGCTT AGGTTTAGCA AAGCAGCTAC TACAAACTCA AGAGCGTTGG
GCGAAAGAGC AGGGCTACCA TCAGATTGAG GTAAAAACCT TAAATCGCTT TACCTCCATG
CTTAAGATGC TTATTTCAAA CCAATATCAG ATCACCAATC TTAAGCAAGA CACTGATAAA
TTAGAACTTA ATAAAATAAG CTTACAAAAG TCATTAGTGG CCTAA
 
Protein sequence
MYQVEIVQAT IVTPELLQSL MELNQAIPEF DNAYPMTEYQ TRLSDKPMLA LFIKVEGEVA 
GFKLGYERDN GQFYSWLGGI LPEFRGLGLA KQLLQTQERW AKEQGYHQIE VKTLNRFTSM
LKMLISNQYQ ITNLKQDTDK LELNKISLQK SLVA