Gene Swoo_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0086 
Symbol 
ID6114308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp105698 
End bp106405 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID641631566 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001758482 
Protein GI170724456 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG GCTGGTTAGC CCTTATACAG CAGGCCTTAG GCCTGCTGTT TTCATTGGAT 
CCAGATGTAT GGTCCATTGT TTCTGTCTCC TTTTCTGTCT CTTTTGCAGC ACTGGCGATC
ACTCTACTTC CCTCAATGAT ATTGGGTTTT ATTCTGGCTT TCGGACGGTT TCGCGGACGC
TGGTTTATCA CCAATATGAT CCAAACCCTG CAATCGATCC CCACAGTCGT TATCGGTCTA
CTGGTTTACC TAATGCTGAC TCGCATGGGT CCCTTGGGCG ATCTAAGATG GCTATTCACG
CAAAAGGGGA TGATACTGGG TCAGATGCTG ATCTGCGCCC CCGTGCTAGT CTCGATGAGC
CAAGCCGCTT TTACTAGTGT CGATAGGCGT GCATGGGAAA CATCACGTAC CTTAGGCGCC
TCTTGGTTCA GATCCATCTG GACACTCTGC AGAGAGCTAA AAGTGCCTCT ACTGCTGGCC
ATCGTCGCGG GATTTAGCCG AATATTAACT GAAATAGGCT GCTCAATGAT GGTGGGAGGT
AACATTGCCG ATGTCACCCG TAATATACCC ACGGCCATCG CCTTGGAAAC CAGTAAAGGG
GACTTTGCAC AAGCGATAGC GCTTGGCTTA GTGCTGCTTA TCCTGTCACT TGTTCTCAAC
TTCACCTTAG GTACGCTAAG GGGAAAAGCT GAGCCGAGGA GCCATTAA
 
Protein sequence
MNEGWLALIQ QALGLLFSLD PDVWSIVSVS FSVSFAALAI TLLPSMILGF ILAFGRFRGR 
WFITNMIQTL QSIPTVVIGL LVYLMLTRMG PLGDLRWLFT QKGMILGQML ICAPVLVSMS
QAAFTSVDRR AWETSRTLGA SWFRSIWTLC RELKVPLLLA IVAGFSRILT EIGCSMMVGG
NIADVTRNIP TAIALETSKG DFAQAIALGL VLLILSLVLN FTLGTLRGKA EPRSH