Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0078 |
Symbol | |
ID | 6114300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 94604 |
End bp | 95419 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641631558 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001758474 |
Protein GI | 170724448 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAC TTCCGGAAGT TGAGGTCACC CGTCAAGGGG TCTCACCCTA TCTGATTGAC CAAGAGGTCA CAGGCCTTAC CGTACGTAAC GCCAGCTTGC GTTGGCCCGT CCCTGATTTG GCGCAGCAGA TTGTCGGTCA AACCATACGT AGTGTGCATC GCCGCGCTAA ATATCTGCTT ATTGATACCG ATGCAGGTAC GACAATTGTG CATCTAGGTA TGTCTGGCAG CTTAAGGGTG GTGACAGAGC TCACTCCGGT TGAGAAGCAT GACCATATCG ATTTAAGCTT GGCCAGTGGC AAGATACTGC GCTTTAACGA CCCGAGGCGC TTTGGTGCTT GGTTATGGTA TGAGCTGCCC ATTGATGCAC ACCCCCTACT GTCTAAACTT GGGCCCGAAC CTTTAACTGA TGCATTCAAT CCAAGCTATC TGTTTGAATC GTTAAAAGGG AAGAAAAAAG CGATAAAGCT CTGTCTGATG GATAACCATA TCGTGGTTGG TGTAGGCAAT ATCTACGCTA ACGAGGCTCT CTTTGCAGCG GGAATACATC CACAAATGGA AGCGGGTAAG GTAGATCAAG AGCGCTTGAT TATCTTAGTT TCAGAGGTGA AACAGATCTT AGCCAATGCG ATAAAACAGG GGGGAACCAC CCTAAAAGAC TTTACCAACG CCGAAGGCAA GCCTGGCTAC TTTGCCCAGA AGCTTCACGT TTATGGCCGC GGAGGAGAGA GCTGTACTCA GTGTGGTAAC CTGCTCAGTG AGATTAAGTT AGGCCAGAGA GCCACTGTAT TCTGTGGCTT GTGCCAAACG AGATAA
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Protein sequence | MPELPEVEVT RQGVSPYLID QEVTGLTVRN ASLRWPVPDL AQQIVGQTIR SVHRRAKYLL IDTDAGTTIV HLGMSGSLRV VTELTPVEKH DHIDLSLASG KILRFNDPRR FGAWLWYELP IDAHPLLSKL GPEPLTDAFN PSYLFESLKG KKKAIKLCLM DNHIVVGVGN IYANEALFAA GIHPQMEAGK VDQERLIILV SEVKQILANA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR GGESCTQCGN LLSEIKLGQR ATVFCGLCQT R
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