Gene Swoo_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0077 
Symbol 
ID6114299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp93017 
End bp94522 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content48% 
IMG OID641631557 
Producthypothetical protein 
Protein accessionYP_001758473 
Protein GI170724447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.845659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAT CTTATAGCAC AAAGCTTATT GCCGTTTTTC TGTTTTGTAC TTCTTTGTTG 
TCAGCCTCGT TTGCAGCCCT ATCGGCTCCC TGGGTCGATG TGTCTGATAT CTACCTAAGG
GCTGATATTC AGGCGTTGGC CGATGAAGGC GTGATCACTG TGCCTGTTAA TACCTATCCA
CTGATGTGGT CTGGTATTGC GGTTGATCTC GATAAAGTTG AGCCATCAAC TCTGACGCCT
GCATTAGCAA AAGCGTTCGC TCGAGTGAAT TTCTACTATC GTAATGCCGT AGGTAACAAA
GGTAACACAC GGATTAAGGC CGCTGCTGCA ACGGATCCTG CTCGTTTCCA GCACTTTGGT
TCAGATTATC GTGAAAAAGG GGAACTGCAG GTTTCCCATG AATACCTTGG TGAGCGTTTC
GCTTATAAGA TTGCCGCCTC TGCTAACTAT GATGCGACAG ATGATAAAGA GTTTCGCCTC
GATGACTCTT ATATAGCGAT GGCGCTGGGT AACTGGATGT TTACCGCCGG TGCCATTGAG
CAGTGGTGGG GGCCAGGTTT CGATTCCGCC ATGCACAGAT CAAACAATGC GCGTCCTTTG
CCATCTGTGA TGGTGACTCG CAATAATGCG GCAGCCTTTG AAACCCCTTG GCTCTCTTGG
TTAGGCCCTT GGACGCTAAC AGCAGGTGTG AGCCGTCTAG AGGAGGAGCG TGCTATTGCT
AATCCTCTAC TGTGGAACTT TCGCAGCTCA CTACGCCCCT TTAGACAACT AGAGATAGGT
TTCTCGTGGG CAACCCAGTT CTGTGGAGAG GGCGAGGAGT GTTCGTTTAA GAGCGCGCTG
AAATCGATAA CTGGTCAACG TGATTGTCGT GCTGAAAATG TCGGCGAAGT TGGCTGTAGT
AGTTACGGTA ATCAGATGGC CGGTTATGAT GTTCGCTTTA GCGATACTTG GTTTAATGTG
CCTTTTGGTA TCTATTACGA GAAGACCTGT GAAGATGCTA ACGGTTCAGC CCCTTGGGAC
ATTGTCGATT GTGGTCACGC AGCGGGTCTA GATACACGTT TTAGCTCAGA CAGCGCTCAG
TACAGACTGT TTTTCGAATA CACAGATACC ATGGTCGCCT GTGGTGCCGA TGATAATGTC
TTTAACTGCA TGTATGAGCA TAGCGAGTAC AAAAGTGGCT CACGTTACTA CGGTAAAACC
TATGGCAGCA CCTATGAGAG CGATGCCATC GTTTATGCGC TGGGCTTAAT CGGCCAGTTT
GAAAATAGTA AAGGGCTCAC CTCTATTGTG AGATATGCTC AGCTTAATAA AGATGGTTCA
AGCCGGAACA ATGGCTGGGC GCCACAGTCG CCTAAAGAAG ATCTGTTAAT GTTGGAGCTG
AGCTACCGTA TGCCTATTTG GCAGGGGATG ATGAGTGTTG GTGGCACTGT GTCTCAATCT
GAGTTTGAGG TTGAAGATAA AAAGACAGAT GCGACACTAT TTGGCACCTA CGAGTATCGT
TTTTAG
 
Protein sequence
MLKSYSTKLI AVFLFCTSLL SASFAALSAP WVDVSDIYLR ADIQALADEG VITVPVNTYP 
LMWSGIAVDL DKVEPSTLTP ALAKAFARVN FYYRNAVGNK GNTRIKAAAA TDPARFQHFG
SDYREKGELQ VSHEYLGERF AYKIAASANY DATDDKEFRL DDSYIAMALG NWMFTAGAIE
QWWGPGFDSA MHRSNNARPL PSVMVTRNNA AAFETPWLSW LGPWTLTAGV SRLEEERAIA
NPLLWNFRSS LRPFRQLEIG FSWATQFCGE GEECSFKSAL KSITGQRDCR AENVGEVGCS
SYGNQMAGYD VRFSDTWFNV PFGIYYEKTC EDANGSAPWD IVDCGHAAGL DTRFSSDSAQ
YRLFFEYTDT MVACGADDNV FNCMYEHSEY KSGSRYYGKT YGSTYESDAI VYALGLIGQF
ENSKGLTSIV RYAQLNKDGS SRNNGWAPQS PKEDLLMLEL SYRMPIWQGM MSVGGTVSQS
EFEVEDKKTD ATLFGTYEYR F