| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0070 |
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| Symbol | |
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| ID | 6114292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 86534 |
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| End bp | 87577 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631550 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001758466 |
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| Protein GI | 170724440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00130455 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTAA ACTTAAATAG CATTACCTCT TTGTGTTTAC TTCGCCTCTC AGCAATTGGC
GATGTGTGCC ATGCCGTAGC TATGGTGCAA GCGATACAGA AGCAATACCC CAACCTCAAG
ATCACTTGGG TGATAGGTAA AGTTGAATAT CAGCTTCTTA AGCACTTGCC TGGCGTGGAG
TTTGTTATTT TCGATAAGTC TCAGGGGTGG AGAAGTTACT TTAATTTGAG AAAAGCGCTG
GCAGGACAGA GGTTTGATGT TTTGCTGCAT ATGCAAGTTG CGCTGCGAGC AACGATTGCA
TCATTGGCTA TCTCGGCTAA AACCCGTATT GGCTTCGATC GTGCCCGCGC AAAAGAGGGG
CAGTGGTTAG TCACAAACCA TAGAGTGGAT GCGATAGCCT CTCCCCATGT GCTTGAGGGC
TTTATGGGGT TTGCTAAAAC CCTAGGAGTG ACAGAGTTAA CGCCACAGTG GAATATTCCT
GTCCCAGAGG CTGATACTGA GTTTGCTAAG CTGTTACTAC CCGATGGAGA GAGGAGTTTA
GTGATCTGTG CGGCTGCCAG TAAAGCTGAG CGTAACTGGT TACCTGAGCG CTATGCAGCT
GTCGCTGAAC ATGCCATTGC TAAAGGTTAC CGAGTGATCC TGTGTGGTGG ACCTACTGAG
TTAGAGCAAA CTTTGGCGCA ACAGATTGTG AGTCACAGCT CGCGGCCACT GGAAAATCAA
GTGGGTAAGA CCACACTGAC TCAGCTACTG GCGGTATTAA AGCAAGCTTC AATCGTATTA
GCACCTGATA CAGGACCTGC TCATATGGCG GTTACACAGG GTACGCCAGT TATCGGGCTA
TATGCCCACT CCAATCCTGG GCGTACAGGG CCTTATATGA GTCTTGAACA TGTGGTGAGC
GTTTATGACA AGGCGATAGC GAGTCAACAT AGTCAGCCAG TTGTTTGGGG AACACGAGCC
AAAGGTGAAC ACCTTATGGA GATGATTGAG GTCGCTCCTG TACTGTCTGT GTTTGATGAT
TTAGCCCGTG AGTTTGATAA GTAA
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| Protein sequence | MSLNLNSITS LCLLRLSAIG DVCHAVAMVQ AIQKQYPNLK ITWVIGKVEY QLLKHLPGVE
FVIFDKSQGW RSYFNLRKAL AGQRFDVLLH MQVALRATIA SLAISAKTRI GFDRARAKEG
QWLVTNHRVD AIASPHVLEG FMGFAKTLGV TELTPQWNIP VPEADTEFAK LLLPDGERSL
VICAAASKAE RNWLPERYAA VAEHAIAKGY RVILCGGPTE LEQTLAQQIV SHSSRPLENQ
VGKTTLTQLL AVLKQASIVL APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYMSLEHVVS
VYDKAIASQH SQPVVWGTRA KGEHLMEMIE VAPVLSVFDD LAREFDK
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