| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0051 |
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| Symbol | |
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| ID | 6114272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 61551 |
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| End bp | 62552 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631530 |
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| Product | lysophospholipase |
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| Protein accession | YP_001758447 |
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| Protein GI | 170724421 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.18197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTAG CCCTAGATCA ACAAACACAC GCTCAACCTC AAGCTGCTGA TAACACTTTT
TCATCGGAGC ACGCACTCAA CACAGCTGAG CAGCAAGCAT TTTGGCAAAC AGTCACCCAA
TCGGTCATCA AAACCTCTGA CAATATCAAC TTAGCTTATG CTTATGTAGC ACATCCAGGT
AGCACCAAGG CTATCGTGAT CAGTAATGGT AGAGTTGAAT CTTATTTAAA ATACCAAGAG
CTGATATTTG ATCTTTATCA GCAGGGCTAT AGCATTTACG CCATCGATCA TCGTGGCCAA
GGCCTTTCAA GTAGAACCAC AGCCAACACA CACCAAGGCC ATATAGACAG ATTTGATACC
TATGTCGAAG ACTTCGCCCT CTTTATCGAC GAAATAGTGA CACCAAATCA GCATCAGGAG
CTGTTTCTAG TTGGCCACTC TATGGGTGGG GCCATAGGTA CTCTTTATCT GAATAAACAC
CCACAAACAT TCAAGGCGGC TGTTTTTTCA GCCCCCATGT ATGGCATTAA ACTGCCTATT
AGTCGCCGCT TTATCCGCTG GTTGGCTAAA CAGCTAGATA CTAGCTCGCC CAACAAAGAG
CCCAACTATA TTTTGGGTGG TAAAGATTAC GACCCTGTAG CTTTTGCCAA AAATGATCTT
ACCCATAGTC AGTTGCGTTA CGAAAATTAC CGCACACTCT ATGAGATCCA CCCAGAGTTA
AAGCTCGGGT CACCAACCAA CCACTGGTTA TTTGAATCAA TTGATGCAGG GGAAAAGACG
GTTGAAGCGG CTAAAAACAG TGATACGCCC ATCTTAATCC TTCAGGCTGA TGAAGATACT
ATTGTCGATA ACTTCGCCCA GTACCACGCC GTCAGTGACC GCTGTATGCT TATCAATATC
CCTAATGCTC GTCATGAGCT CTTTATGGAG CGAGATGAGA GCAGAAACTT GACGCTTACA
GAGCTAATTA ACTTCTTTGA TAAGTATTCT GCGAAGCCGT AA
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| Protein sequence | MSLALDQQTH AQPQAADNTF SSEHALNTAE QQAFWQTVTQ SVIKTSDNIN LAYAYVAHPG
STKAIVISNG RVESYLKYQE LIFDLYQQGY SIYAIDHRGQ GLSSRTTANT HQGHIDRFDT
YVEDFALFID EIVTPNQHQE LFLVGHSMGG AIGTLYLNKH PQTFKAAVFS APMYGIKLPI
SRRFIRWLAK QLDTSSPNKE PNYILGGKDY DPVAFAKNDL THSQLRYENY RTLYEIHPEL
KLGSPTNHWL FESIDAGEKT VEAAKNSDTP ILILQADEDT IVDNFAQYHA VSDRCMLINI
PNARHELFME RDESRNLTLT ELINFFDKYS AKP
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