Gene Swoo_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0046 
Symbol 
ID6114263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp50332 
End bp50781 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID641631521 
Productglobin 
Protein accessionYP_001758442 
Protein GI170724416 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0363016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.25879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGA TTAAAAAAAT CTTTCAAAAT AGCCCCAAAT CACCTCAGAG TGAGGATAGT 
GTCAGAGATC CGCAACAATC TAATGCCTAT GATTTGATTG GCGGCGAACC TGTAATACGC
GCTTTAGCCC ACCAGTTTTA TCTGCAGATG CTGCAACAAG GCCGAGCCAG TGAACTGCTC
TCTATCCATA AAGCACCAAT AACAGAGTCG GAGCAGAAGC TATTTGAATT TCTTAGTGGG
TGGTTAGGCG GGCCTGGATT GTTCGAACAA AAATACGGTC ATCCAGCATT AAGGGCACGT
CATATGCCAT TTCAAATAGA TGAAGAGATG CGAGACCAGT GGTTATTTTG TATGAAGCGG
GCCATTGAGA TAGAGATTAG TCACCCTGAA CATCAAGCCG CAATCTACCA AGCAATCAGC
ACTCTCGCTG ACCATATGCG TAACCAATAA
 
Protein sequence
MNWIKKIFQN SPKSPQSEDS VRDPQQSNAY DLIGGEPVIR ALAHQFYLQM LQQGRASELL 
SIHKAPITES EQKLFEFLSG WLGGPGLFEQ KYGHPALRAR HMPFQIDEEM RDQWLFCMKR
AIEIEISHPE HQAAIYQAIS TLADHMRNQ