Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0044 |
Symbol | |
ID | 6114261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 48724 |
End bp | 49281 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641631519 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_001758440 |
Protein GI | 170724414 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.268227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.36574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGAGC AGGCTCCTGC TGAAGTTAAA CAGGTGATAG AGAGTGGTGG GGTGGTTGCG TACCCGACAG AGGCGGTTTA TGGCCTAGGT TGCGATCCCG ATAATGATGC TGCTATTACT AAATTGTTGG CGATAAAGAA GCGGCCTTGG GAGAAGGGAT TGATTTTGGT TGCAAGCGAT TATCAGCAAC TGCTTCCCTA TATCGATGAT TCACAACTGA CCGAAGAACA GCGTGAGCGG GTATTCAGTA AATGGCCCGG TCCGTTTACC TTTATCATGC CGATTAAACC TGGCATCTCT AATTTGTTAT GTGGCAGTTT TAATTCACTC GCAGTAAGAG TTTCCGACCA CCCGACAATT CAAGCGATAT GTCAGCAGCT TGGAAAGCCA TTAGTCTCTA CCAGTGCCAA TCATTCAGGT GAAGAACCAG CAATGAGCCA TGAAGAGATC CTTGCCAAAT TTGAAGGGGA GATAGACGCT TTAGTGGCAG GTAGCTTAGG GGAACAAAGA AAGCCTTCTA CTATCATAGA TGCCATCAGC GGCAAGATAT TACGTTAG
|
Protein sequence | MLEQAPAEVK QVIESGGVVA YPTEAVYGLG CDPDNDAAIT KLLAIKKRPW EKGLILVASD YQQLLPYIDD SQLTEEQRER VFSKWPGPFT FIMPIKPGIS NLLCGSFNSL AVRVSDHPTI QAICQQLGKP LVSTSANHSG EEPAMSHEEI LAKFEGEIDA LVAGSLGEQR KPSTIIDAIS GKILR
|
| |