| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0036 |
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| Symbol | |
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| ID | 6114253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 40360 |
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| End bp | 41637 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631511 |
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| Product | sun protein |
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| Protein accession | YP_001758432 |
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| Protein GI | 170724406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.569301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGC GTGCACTTGC GGCCAAGGTC GTTTTTCAGG TATTGGAGAA AGGGATCTCC
CTCTCTGTTG CCCTGCCTGA ACAGCAGAAA CATTGCGAAA GCGGTAAAGA TAAAGCCCTA
TTAGCAGAGC TAAGTTACGG GGTGATGCGT CAACTGCCAC AACTCGATAA ACTGATCAGC
GATTGCATGG CTAAACCACT TAAAGGGAAG CAGAGGATTT TGCACCAACT GCTTTTGGTC
GGCTGCTATC AACTCTACTT TACCCGTATC CCAAGCCATG CGGCGATCTC AGAAACTGCG
GAAGCTTGTC GCCAGCTAAA GTTCGATGGC CTAGTAAAAG TGATCAACGC AGTGCTGCGT
AATATTCAGC GTCAAGAGAA GCCACTGCCG ACTGACAACG ATACGCTGAC TTACAATACT
CCAGCTTGGA TAATAAAAAG CCTCAAACAG GCCTACCCAG ACAGTTGGCA AACAGTCATT
GAAAACAGTC ATCAACGTCC ACCAATGTGG TTACGCAACA ATGTTCGCTC TCAAACTCGC
GATGAATATC TAGCACTGCT AGCAGAGGCT GAGATATCAG CTTCAGCGGG ACAAAGTAGC
GATGCTATCT TACTTGAGAG CCCTAAAGAC GTGATGCAAT TGCCAGGTTT TGAACAAGGT
GCGGCCTCAG TTCAGGACGG CGCAGCGCAA TGGGCTGCCA CCCTATTGGC CCCTGCCGAT
GGCGAGTTAA TTCTCGATGC TTGTGCCGCT CCTGGCGGTA AAACCTGCCA CATACTTGAG
CGCGCTGACA CAGAGTTAGT GGCGGTGGAC TTCGATGCTA ACCGACTCGA GCGGGTACAG
CAGAATTTGG ACCGCCTTTC ACTAAACGCT AAGCTAGTTC ATGGCGATGC GGCTGATATC
GATTCCTGGT GGCAAGGTGA TAAGTTTGAC CGAATTTTGC TCGATGCCCC TTGCTCAGCA
ACAGGTGTCA TTCGTCGTCA TCCAGATATC AAGTGGTTAA GAAAACAGGC TGATATTGAA
GAGTTAGCCC AGCTTCAAAG CAAGATATTG GATCATTGCT GGAAGTGGCT TAAACCTGGT
GGCACACTGC TATACGCAAC CTGCTCAATT CTTCCACAAG AGAATGCACA GCAGATTAGT
GCTTTCCTTG AAAGAACGCA TGATGCTACG CTCATTGCTA TCTCGCAGCA GCCAAATCCT
GACGACATAG GCTGGCAGAT CACTCCGGGC ACGGAGAATA TGGACGGATT CTATTACGCA
CGCCTAGTAA AGGGATAA
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| Protein sequence | MNLRALAAKV VFQVLEKGIS LSVALPEQQK HCESGKDKAL LAELSYGVMR QLPQLDKLIS
DCMAKPLKGK QRILHQLLLV GCYQLYFTRI PSHAAISETA EACRQLKFDG LVKVINAVLR
NIQRQEKPLP TDNDTLTYNT PAWIIKSLKQ AYPDSWQTVI ENSHQRPPMW LRNNVRSQTR
DEYLALLAEA EISASAGQSS DAILLESPKD VMQLPGFEQG AASVQDGAAQ WAATLLAPAD
GELILDACAA PGGKTCHILE RADTELVAVD FDANRLERVQ QNLDRLSLNA KLVHGDAADI
DSWWQGDKFD RILLDAPCSA TGVIRRHPDI KWLRKQADIE ELAQLQSKIL DHCWKWLKPG
GTLLYATCSI LPQENAQQIS AFLERTHDAT LIAISQQPNP DDIGWQITPG TENMDGFYYA
RLVKG
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