| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0025 |
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| Symbol | |
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| ID | 6114242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 32358 |
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| End bp | 32885 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631500 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001758421 |
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| Protein GI | 170724395 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00857411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGA CGCTTATTAT CTACTCGACG GTTGACGGAC AAACCCGTGC AATTTGTGAG
CTAATGAAAG GGGTGAATCA GGCCGCTGAA AGTGAAGTGA CATTGGCTTC ACTTGAGGAG
GCAAAAGCGT TGAGTTTGGC TGACTTTGAT AAGGTGATGA TTGGTGCCAG TATTCGATAT
GGTAAGCATA GGCCTGAACT TTATCAGTAT ATCAATAATC ACCATGCGGT ATTGAGTGCC
AAGCCTAACG CTTTTTTTAC AGTGAATGTA GTGGCAAGAA AGCCTGAGAA AAACACTCCA
GAAACGAACC CCTATATGAA GAAGTTTCTC GAGCTATCGC TGTGGAAGCC TCAGCAGTTA
GGTGTGTTTG CTGGTAAGAT CGATTATCCC AAATACCGTT TTTTTGATAA GACCATGATA
CGTTTTATCA TGTGGATGAC AAAAGGCCCC ACGGATACAT CGGGTACTTA TGAATTTACC
AACTGGCAGC AAGTTGAGGA GTTTGGCAAG GCATTTGCCG ATAGATAG
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| Protein sequence | MNKTLIIYST VDGQTRAICE LMKGVNQAAE SEVTLASLEE AKALSLADFD KVMIGASIRY
GKHRPELYQY INNHHAVLSA KPNAFFTVNV VARKPEKNTP ETNPYMKKFL ELSLWKPQQL
GVFAGKIDYP KYRFFDKTMI RFIMWMTKGP TDTSGTYEFT NWQQVEEFGK AFADR
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