| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0012 |
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| Symbol | glyS |
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| ID | 6114229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 15573 |
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| End bp | 17642 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631487 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001758408 |
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| Protein GI | 170724382 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000111985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTATG AAAACTTACT CATTGAAGTT GGTACCGAAG AGCTGCCTCC AAAAGCCCTG
CGCAAACTGG CAGAATCTTT TGTTAGCAAC TTTACCGATG AGCTTGAAAA AGCAGAACTA
AGCTTCGAAT CGGCCCAGTG GCACGCAGCC CCTCGCCGCC TAGCTTTTAC TGTAAACCAA
TTAGTTCTAG CGCAAGCTGA CAAGGTCGTT GAGAAGCGTG GGCCTGCGAT TGCCCAAGCA
TTTGATGCCG ATGGCAACCC AACTAAAGCC GCCATGGGCT GGGCTCGTGG TAACGGTATT
AGCGTTGAAC AAGCTGAGCG CCTAAAAACA GATAAAGGTG AATGGCTACT TCATCAAGCT
AAAGTTGTTG GTGTAGAAAC CAAAAGCCTT ATCAATGACA TGGCACAACG CGCCCTCGAT
AAATTGCCAA TTCCTAAGCC TATGCGTTGG GGAACAAGCA AGACTCAATT TATCCGTCCT
GTACACACAG TCACTATGTT ACTAGGTAGT GAGCTCGTTG AAGGTGAGCT CCTTGGCGTT
AAATCGGCTC GTGTTATTCG TGGTCACCGA TTCATGGGTA AAAAGAGTTT TGAGTTAGAT
CATGCTGATA ACTACCTGTC TGCACTCAAA GAGCAAGGCA TGGTTCTTGC CGATTATGAA
GCGCGTAAAG CGATCATAAA AACAGATGCA GAGGCTGCAG CCGCTAAGAT TGGTGGTGTT
GCAGATCTTG AAGATGATCT ACTTGAGGAG GTTACCTCCC TAGTTGAGTG GCCGGTTGTG
CTAACGGCAA ACTTCGAAGA GAAGTTCCTC GATGTACCAG CAGAAGCCCT GGTTTACACC
ATGAAAGGCG ATCAGAAGTA CTTCCCAGTC TTCGATAAAG CTGGCCAATT ACTACCTCAC
TTCATCTTCG TGACTAATAT CGAATCGAAA GATCCTCAAG TGATCATATC TGGTAATGAG
AAAGTGGTTC GTCCACGTCT TGCCGATGCA GAGTTCTTCT TCGAAACCGA CAAGAAACAA
ACTCTTGAGT CTCGCCTTGC TAGCCTAGAA ACGGTAGTTT TCCAAAAACA ACTTGGCACA
ATCAAGCAGC GTGTTGAGCG TATCTCACAA CTTGCGGGCT ATATTGCGGC CTCAATAGAT
GCAGATAGCG ATGAAGCCTC ACGTGCAGGT CTACTCTCTA AGTCAGATCT GATGACGAAC
ATGGTAATGG AGTTCACCGA TCTTCAAGGC ACTATGGGCA TGCACTATGC GCGCCTTAAC
GGTGAAACTG AAGCCGTCGC TGTTGCCCTT GCTGAGCAGT ATAAGCCTAA GTTCTCTGGC
GATACTGTAC CAACAGCGCC TATCTCAGTC TGTGTTGCAC TGGCTGAAAA GCTAGATACC
TTAGTCGGTA TTTTCGGTAT CGGACAAGCA CCAAAAGGTG CAGCAGATCC ATTTGCACTA
CGCCGTGCAG CAATTGGTGT ATTGCGTATC TGTTTAGAGA ATAATCTGCC ACTAGATCTT
GTTGATTTAA TAGCTAAAGC ACAAGAGCTA CACGGTGATA ATCTCACGAA TGATAAAGCC
GCAGAGCAGG TACTTGAGTT CTTTATGGGA CGTTTCCGCG CTTGGTACCA AGATCAAGGT
GTTAGCGTAG ATGTGATTTT AGCAGTACTA GCTCGCCGTC CTACAGCCCC TGCTGATTTC
GATAGCCGTA TTAAAGCCGT TGCTCACTTC AGAAGCCTTG AACAGGCGTC TGCACTTGCA
GCAGCGAATA AGCGTGTATC AAATATTCTG GCAAAAGTTG AAGGTGAACT AGCCACTGAT
ATCAGCAGTG AGCTATTGGT GGAAAACGCT GAAAAGGCAC TAGCTGAAAA GCTAAATGAG
CTTCAACCTC AACTAGCACC TCTGTTTGCT GCAGCTAACT ACCAGCAAGC GCTATCTTTG
CTAGCCGATC TACGTGAAAG CGTCGATACC TTCTTCGAAG ATGTGATGGT GATGGCAGAT
GATGAAGCCC TAAAGAACAA TCGCTTAGCC TTGTTATCAA GCCTGCGCGA ACAGTTCCTT
CACGCTGCAG ATATCTCACT GCTTCAGTAA
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| Protein sequence | MNYENLLIEV GTEELPPKAL RKLAESFVSN FTDELEKAEL SFESAQWHAA PRRLAFTVNQ
LVLAQADKVV EKRGPAIAQA FDADGNPTKA AMGWARGNGI SVEQAERLKT DKGEWLLHQA
KVVGVETKSL INDMAQRALD KLPIPKPMRW GTSKTQFIRP VHTVTMLLGS ELVEGELLGV
KSARVIRGHR FMGKKSFELD HADNYLSALK EQGMVLADYE ARKAIIKTDA EAAAAKIGGV
ADLEDDLLEE VTSLVEWPVV LTANFEEKFL DVPAEALVYT MKGDQKYFPV FDKAGQLLPH
FIFVTNIESK DPQVIISGNE KVVRPRLADA EFFFETDKKQ TLESRLASLE TVVFQKQLGT
IKQRVERISQ LAGYIAASID ADSDEASRAG LLSKSDLMTN MVMEFTDLQG TMGMHYARLN
GETEAVAVAL AEQYKPKFSG DTVPTAPISV CVALAEKLDT LVGIFGIGQA PKGAADPFAL
RRAAIGVLRI CLENNLPLDL VDLIAKAQEL HGDNLTNDKA AEQVLEFFMG RFRAWYQDQG
VSVDVILAVL ARRPTAPADF DSRIKAVAHF RSLEQASALA AANKRVSNIL AKVEGELATD
ISSELLVENA EKALAEKLNE LQPQLAPLFA AANYQQALSL LADLRESVDT FFEDVMVMAD
DEALKNNRLA LLSSLREQFL HAADISLLQ
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