Gene Swoo_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0001 
SymboldnaA 
ID6119314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp397 
End bp1785 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content44% 
IMG OID641631476 
Productchromosomal replication initiation protein 
Protein accessionYP_001758397 
Protein GI170724371 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.81438e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.18337e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCGGTTT CACTTTGGCA GCAATGCATC GGGCGACTAC AAGATGAGCT ATCGGCTCAG 
CAGTTCAGTA TGTGGATCAG ACCTTTGCAA GCAGAGATGG ATGGGGACAC ACTTGTTCTT
TATGCGCCAA ATCGCTTTGT ACTCGACTGG GTTAGAGATA AGTACATCAA TATCATCAAT
CAGTTCTTTA CCGAACAGAT GGGAAGCGAT GCACCTAAGC TACGCTTTGA TATTGGTAGC
AGACCCTCTG CGCCTAAACC TATTCAGGCG ACCGCTGCGG TGGTTAAGCC TAAGCTAGAG
TCGAGCCCAC AAAAAAGTCA GACTTCGTTT AATGTTAACG CTCCTGAGCC TGCAGCGACG
GCTAATCACA GAAGTAATAT CAATCCTACC TATCAGTTTG AGAACTTCGT TGAGGGTAAG
TCTAACCAAC TTGGTAAGGC GGCCGCTCTA CAAGTAGCTG AAAATCCAGG TGGTGCTTAT
AACCCACTCT TCCTTTATGG CGGAACCGGT TTAGGTAAGA CTCACTTATT ACACGCTGTG
GGTAATGGCA TCATTAAGAA TAAGCCGAAT GCAAAAGTGG TATATATGCA TTCTGAGCGT
TTTGTGCAGG ATATGGTTAA GGCATTGCAA AATAATGCCA TCGAAGAGTT CAAGCGTTAC
TACCGTAGTG TCGATGCACT GTTTATCGAT GATATTCAAT TCTTTGCTAA TAAAGATAGA
TCTCAGGAAG AGTTTTTCCA TACCTTTAAT GCACTATTAG AGGGAAATCA TCAGATCATC
TTGACCTCAG ATCGTTATCC AAAAGAGATC GATGGTGTTG AAGATAGACT TAAGTCGCGT
TTCGGTTGGG GCCTAACGGT TGCAATTGAA CCACCAGAAT TAGAAACACG TGTGGCGATC
TTGATGCGTA AGGCACAAGA GAGTGGCATT AACCTCCCAG ATGAAGTGGC ATTTTTTATT
GCTAAGCGTT TACGATCGAA CGTTCGTGAG CTCGAAGGCG CATTGAATCG TGTTATTGCG
AATGCTAACT TCACAGGTCG ACCAATTACT ATTGATTTTG TGCGAGAAGC CCTTAGAGAT
CTCTTGGCTC TGCAGGAAAA ATTGGTCACT ATAGATAATA TTCAGAAAAC CGTAGCTGAA
TACTACAAGA TCAAGATGGC AGATATGCTA TCTAAGCGTC GTTCGCGCAG TGTTGCTCGT
CCACGTCAAG TGGCGATGGC ACTGTCTAAA GAGCTAACGA ACCATAGCTT GCCAGAGATT
GGTGATGCTT TTGGTGGTCG TGACCATACA ACTGTTTTGC ATGCCTGTCG TAAAATTGCA
CAGTTACGTG AAGAAAGTCA TGACACGAAA GAAGATTATG CTAACTTGAT CCGTACGTTA
TCTTCATAA
 
Protein sequence
MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AEMDGDTLVL YAPNRFVLDW VRDKYINIIN 
QFFTEQMGSD APKLRFDIGS RPSAPKPIQA TAAVVKPKLE SSPQKSQTSF NVNAPEPAAT
ANHRSNINPT YQFENFVEGK SNQLGKAAAL QVAENPGGAY NPLFLYGGTG LGKTHLLHAV
GNGIIKNKPN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALFID DIQFFANKDR
SQEEFFHTFN ALLEGNHQII LTSDRYPKEI DGVEDRLKSR FGWGLTVAIE PPELETRVAI
LMRKAQESGI NLPDEVAFFI AKRLRSNVRE LEGALNRVIA NANFTGRPIT IDFVREALRD
LLALQEKLVT IDNIQKTVAE YYKIKMADML SKRRSRSVAR PRQVAMALSK ELTNHSLPEI
GDAFGGRDHT TVLHACRKIA QLREESHDTK EDYANLIRTL SS