| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5613 |
|---|
| Symbol | |
|---|
| ID | 6141687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 5943940 |
|---|
| End bp | 5946615 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641631314 |
|---|
| Product | 2-oxoacid dehydrogenase subunit E1 |
|---|
| Protein accession | YP_001758241 |
|---|
| Protein GI | 170751981 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.703964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.076798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TACCGCCGAA AGCCACGATC GCGCGGTCCG CCGAGGTGGA TCACGACCCG
GCCGAGACCC AGGACTGGCT CGCCGCGCTG GAATCCGTCT TCCGCACCGA GGGCGCGGCC
CGGGCCCGGT TCATCCTCGA CCGCCTGGAG CGGCGCTCGA AGGAGATCGG CATCCTCGAC
GAGGCCCTGC CCTACTCGCC CTACCGGAAC ACGATCGCGC TGGAGAAGCA GCCGCGCTAC
CCCGGCGACC TCGACATCGA GGAGCGCCTG ACCTCGATCA TGCGCTGGAA CGCCCTCGCC
ATGGTGGTGC GCGCCAATAT GGCCTACGGC GAGCTCGGCG GCCACGTGGC GAGCTACGCC
TCGGCGGCGG AGCTGTTCGA GGTCGGGTTC AACCACTTCT TCAAGGGCGG CACGGACGGC
GACCTCGTCT ATTTCCAGCC GCACTCGGCG CCGGGCGTCT ACGCCCGGGC CTTCCTCGAG
GGCCGGCTCT CCGAGGAGCA GCTGAAGCAC TACCGCCAGG AGATCGCCGG CGACGGGCTG
TGCTCCTACC CGCATCCCTG GCTGATGCCG GATTTCTGGC AGGTCCCCAC CGGCTCGATG
GGCATCGGGC CGATCCACGC GGTCTACCAG GCGCGATTCA TGCGCTACCT CGGCGACCGG
GGCCTCGCCG ACACCGCCGG CCGCCACGTC TGGGGCGTGT TCGGCGACGG CGAGATGGAC
GAGCCCGAGT CGATCGGCGG CCTCGCGTTG GCGGCACGCG AGAATCTCGA CAACCTGACC
TTCGTCATCA ACTGCAACCT GCAGCGGCTC GACGGGCCGG TGCGCGGCAA CGGCCAGATC
ATCCAGGAGC TGGAGAGCCT GTTCCGCGGC GCCGGCTGGA ACGTCATCAA GGTGCTGTGG
GGCTCGGAGT GGGACGGGAT CTTCGCCCGC GACACCAACC ACGCCCTGCT GCGCCGCTTC
GCCGAGACGG TGGACGGCAA GTACCAGACG CTCGGCGCCA AGGACGGCGC CTACAACCTC
GCGCACTTCT TCGGCGAGGA CCCGGAGGTG CGCGAGCTCG TCGCCCACAT GTCGGACGCC
GACGTCGACC GGCTGAAGCG CGGCGGCCAC GACTTCCGCA AGCTCTACGC GGCCTTCGCG
GCCGCCAAGG CCACCAAGGG CCGGCCGACG GTGATCCTGG CCAAGACCAA GAAGGGCTAC
GGCATGGGCG GCGCGGGCGA GTCGCGCATG ACCGCCCACC AGGCCAAGAA GCTCGACGTC
GACGCGCTGC GGGCGTTCCG CGACCGGTTC GCCCTGCCGC TGTCGGATGC CCAGGTGGAA
GGTCTCGCCT TCTACAAGCC GGCCGAGGAC GGCGCCGAGA TGCGCTACCT GCGCGAGCGC
CGGGAGACAC TCGGCGGCGT CCTGCCGGCT CGCCGCCGCA CCGCGCCGAC CGTCGCGGTT
CCGGCGCTCT CCACTTACGC GGGCTTCGCC CTGGAGGCCG GCGGCAAGGA GATGTCGACG
ACCACGGCGG TGGTGCGCCT GTTCGGCAAC CTCCTGAAGC ACAAGGATCT CGGGCCGCGC
ATCGTGCCGA TCGTCGCCGA CGAGGCGCGG ACCTTCGGCA TGGCCAACCT GTTCCGGCAG
GTCGGGATTT ACGCGCCGCA GGGGCAGCTC TACGAGCCGG AGGATGCCGG CTCCATGCTC
TACTACCGCG AGGCCCGGGA CGGGCAGCTA TTGGAGGAGG GCATCACCGA GGCCGGGGCG
ATCTCGTCCT GGACCGCGGC GGCCACGTCC TACAGCGTCC ACGGCCTGTC GATGCTGCCG
TTCTACATCT ACTACTCGAT GTTCGGCTTC CAGCGGGTCG GCGACCTGAT CTGGGCGGCG
GCCGACCAGC GGGCCCGCGG CTTCCTGATC GGCGCCACGG CGGGCCGCAC GACGCTCGGC
GGCGAGGGCC TGCAGCATCA GGACGGATCG AGCCACATGC AGGCCGCCGC GATCCCGAAC
TGCCGGGCCT ACGATCCGGC CTTCGCGTAC GAGATGGCGG TGATCGTCGA CCGGGGGGCC
CGGGCGATGA TGGAGGAGGG CGAGGACGCT TTCTACTACC TCACCGCGAT GAACGAGAAC
TACGCCCAGC CCTCCATGCC GCAGGGAGCG GAGGCCGGGA TCCTGAAGGG CATGTACCGC
CTGTCGGGGC CTGAGGCGGG AAGCGCCGCC GTGCGCCTCC TCGGCTCCGG AGCGATCCTG
CCGGAGGTGA TCGCGGCGGC GGCGCTGCTC GCGCAGGATT TCGGCGTCGC GGCCGAGGTG
TTCAGCGTGA CGAGCTTCAG CGAGCTGGCC CGCGATGCCC GCGAGGCCGA GCGGCAGGCG
ATGCTCAACC CGGAGGCCGA GGCGCCGGTC AGCCACGTGG CGGCGCTGCT GCCGGGCCCG
GCGCCCGTCG TCGCGGCGAG CGACTACGTC CGGGCCTACC CGCAGCTGAT CGCCTCCTAT
GTCGGCGCGC GATTCGTCGC CCTCGGCACC GACGGGTTCG GGCGGAGCGA CACCCGCAAC
GCGCTCCGCC GCTTCTTCGA GGTCGACCGG CAGCACGTCG TCGTCGCCGC CCTGCACGCC
CTCGCCGAGG CCGGCACGGT GCCGCGTGCG ACGGTGGCGG ACGCGATCCG CCGCTACAGC
ATCGCGGCGG ACGCGCCCGC GCCCTGGACG ATCTGA
|
|---|
| Protein sequence | MNAIPPKATI ARSAEVDHDP AETQDWLAAL ESVFRTEGAA RARFILDRLE RRSKEIGILD
EALPYSPYRN TIALEKQPRY PGDLDIEERL TSIMRWNALA MVVRANMAYG ELGGHVASYA
SAAELFEVGF NHFFKGGTDG DLVYFQPHSA PGVYARAFLE GRLSEEQLKH YRQEIAGDGL
CSYPHPWLMP DFWQVPTGSM GIGPIHAVYQ ARFMRYLGDR GLADTAGRHV WGVFGDGEMD
EPESIGGLAL AARENLDNLT FVINCNLQRL DGPVRGNGQI IQELESLFRG AGWNVIKVLW
GSEWDGIFAR DTNHALLRRF AETVDGKYQT LGAKDGAYNL AHFFGEDPEV RELVAHMSDA
DVDRLKRGGH DFRKLYAAFA AAKATKGRPT VILAKTKKGY GMGGAGESRM TAHQAKKLDV
DALRAFRDRF ALPLSDAQVE GLAFYKPAED GAEMRYLRER RETLGGVLPA RRRTAPTVAV
PALSTYAGFA LEAGGKEMST TTAVVRLFGN LLKHKDLGPR IVPIVADEAR TFGMANLFRQ
VGIYAPQGQL YEPEDAGSML YYREARDGQL LEEGITEAGA ISSWTAAATS YSVHGLSMLP
FYIYYSMFGF QRVGDLIWAA ADQRARGFLI GATAGRTTLG GEGLQHQDGS SHMQAAAIPN
CRAYDPAFAY EMAVIVDRGA RAMMEEGEDA FYYLTAMNEN YAQPSMPQGA EAGILKGMYR
LSGPEAGSAA VRLLGSGAIL PEVIAAAALL AQDFGVAAEV FSVTSFSELA RDAREAERQA
MLNPEAEAPV SHVAALLPGP APVVAASDYV RAYPQLIASY VGARFVALGT DGFGRSDTRN
ALRRFFEVDR QHVVVAALHA LAEAGTVPRA TVADAIRRYS IAADAPAPWT I
|
|---|
| |