| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5430 |
|---|
| Symbol | |
|---|
| ID | 6141503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 5735177 |
|---|
| End bp | 5737894 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641631132 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_001758060 |
|---|
| Protein GI | 170751800 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0396856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACA AGACCTTCGA GCCCACCTCC GTCGAGGCGC GGATCTCCGC TGCCTGGGCC
GAGGCGGACG CCTTCCGCGC CGGCCGACCC GAGCGCGCCG GCGCTCCGCC CTACTGCATC
GTGATCCCGC CGCCGAACGT GACGGGCTCG CTGCACATGG GTCACGCCCT CAACAACACG
CTGCAGGACA TCCTCTGCCG CTTCGAGCGC ATGCGCGGCA AGGACGTGCT CTGGCAGCCG
GGGACGGACC ATGCCGGCAT CGCCACCCAG ATGGTGGTGG AGCGGCGGAT GATGGAGCGT
CAGGAGCCGG GCCGCCGCGA GATCGGCCGC GCGGCGTTCG TCGAGAAGGT CTGGGCCTGG
AAGGCGGAGT CCGGCGGCGC GATCGTCAAC CAGCTGAAGC GGCTGGGCGC CTCCTGCGAC
TGGTCCCGCG AGCGCTTCAC CATGGACGAG GGCCTGAGCC GGGCCGTGCT CAAGACCTTC
GTCGACCTGC ACCGGCAGGG CCTGATCTAC CGCGACAAGC GGCTGGTGAA CTGGGACCCG
AAGTTCCAGA CCGCGATCTC GGACCTGGAG GTCCAGCAGA TCGAGACCAG AGGCCATCTC
TGGCACTTCG ACTACCCGGT GGTGGACGAG GCTGGCAACG AGACCGGCGC CGTCATCACG
GTGGCCACCA CCCGCCCCGA GACGATGCTG GGCGACACCG GCATCGCGGT CCATCCCGAG
GACGCGCGCT ACACCGCGCT CGTCGGCCAG CGCGTGCGCC TGCCGCTGGT CGGGCGGCTG
ATCCCGATCG TGGCCGACAC CTACTCGGAT CCCGAGAAGG GCACGGGCGC GGTCAAGATC
ACGCCCGCCC ACGACTTCAA CGACTTCGAC GTCGGCCGCC GCCACGGGCT CGGCCTGATC
AACGTCCTCG ACCCCGAGGG CCGGATGCAG CTCGACGGCA ACGCCGACTT CCTCGACGGC
GTCGCGCCCG AGCCGGAGGC CCTGGCGCTC CACGGCCTCG ACCGGGCGCA GGCCCGCAAG
GAGGTGGTGG CGCTGATGGA GGCGCGCGGT CGGCTGCGCG CGATCGAGCC GAACACCCAC
GCGGTCCCGC ACGGCGACCG CTCGGGCGTG GTCATCGAGC CGTACCTGAC CGACCAGTGG
TACGTGAACG TCAAGCCGCT CGCGGAGCGC GCCCTGCAGG CGGTGCGCGA CGGGCAGACC
AAGTTCGTGC CCGAGAACTA CGAGAAGATC TTCTTCCAGT GGCTCACCAA CATCGAGCCG
TGGTGCATCT CGCGCCAGCT CTGGTGGGGC CACCAGATCC CGGTCTGGTA CGACGACGAA
GGCGGTATCT TCGTCGCCGA GAGCGAGGAG GAGGCGCGGG CCGCGGCCGA GGCGCAGCGC
GGCCGACCGG TCGCCCTCAC CCGCGACGCG GACGTCCTCG ACACGTGGTT CTCCTCGGCG
CTCTGGCCGT TCTCGACTCT GGGCTGGCCG GACTCGACCC AGGAACTCGC GCGCTACTAC
CCGACCAACA CCCTGGTGAC CGGCAAGGAC ATCCTGTTCT TCTGGGTCGC CCGGATGATG
ATGATGGGCC TGCACCTCAC CGACCGGGCG CCGTTCGAGA CGGTCTACCT GCACACCCTG
GTGCGGGACG CGTCGGGCGC GAAGATGTCG AAGTCCAAGG GCAACGTCGT CGATCCCCTG
GAGCTGATCG ATCAGGTCGG CGCCGACGTC CTGCGCTTCA CCCTCTGCGC GCTGGCCGTT
CAGGGGCGCG ACATCAAGCT GTCGACCGAC CGGGTCCAGG GCTACCGCAA CTTCGCGACC
AAGCTCTGGA ACGCCGCCCG CTTCGCCGAG CTGAACGGCT GCCGCCTCGA CCCGGCCTTC
GACCCGCGCT CCGCCACCGG CGCGATCAAC CGCTGGGCGC TCACCGAGGC GGCCCGCGCG
GTCGACGAGG TCACGGGCGC CCTCGAGGCC TTCCGCTTCA ACGACGCGGC GGCGGCGGCC
TACCGCTTCG TCTGGAACAT CTTCTGCGAC TGGTATCTCG AGCTCGCCAA GCCTGTGCTC
CAGGGCGAGG GCGTCGATCC CGCGATTCGG GCCGAGACGC AGGCGAGCGT GGCGTTCCTG
ATCGATCAGG TCGCCAAGCT GCTGCACCCG TTCATGCCGT TCCTCACGGA GGAGCTGTGG
GCGATCAAGG GCGCCGACCT GCCGGAGCGC GGCCTGCTGA CCCTGGCCGC CTGGCCGGAC
CTCGGCGGGC TCGCCGACGC GGCCGCGGAG GCCGAGGTCG GGTTCGTGGT CGATCTGGTC
AGCCAGATCC GCTCGGCGCG GTCCGAGACC AACGTCCCGG CCGGCGCGCA GATCCCCCTG
GTCATGGTCG GCGCCGCCCC GGAGGTCCGG GCGCGGGCGG AGGCGTGGCG GGACACGCTC
CTGCGCCTCG CCCGGCTGTC GGAGATCACC TTCGCGGAGA CGCCGCCGAA GAACTCGGTG
CAGCTCCTCG TGCGCGGCAG CGTCGCCGCC CTGCCGCTGG AAGGCGTGGT CGACCTCGCC
GCCGAGGTCG CGCGCCTGAG GAAGGAGCAG GGCAAGGCGC AGGGCGAGAT CAAGAAGATC
GACGCCAAGC TCGGCAACGC CGACTTCGTG GCCCGGGCGC CCGAGGAGAT CATCGAGGAG
AACCGGGAGC GCCGCGAGAG CGAGTCGGCG CGGCTGGCGA AGATCGAGGA AGCTCTGGTC
CGGCTCAGCG GCGACTGA
|
|---|
| Protein sequence | MMDKTFEPTS VEARISAAWA EADAFRAGRP ERAGAPPYCI VIPPPNVTGS LHMGHALNNT
LQDILCRFER MRGKDVLWQP GTDHAGIATQ MVVERRMMER QEPGRREIGR AAFVEKVWAW
KAESGGAIVN QLKRLGASCD WSRERFTMDE GLSRAVLKTF VDLHRQGLIY RDKRLVNWDP
KFQTAISDLE VQQIETRGHL WHFDYPVVDE AGNETGAVIT VATTRPETML GDTGIAVHPE
DARYTALVGQ RVRLPLVGRL IPIVADTYSD PEKGTGAVKI TPAHDFNDFD VGRRHGLGLI
NVLDPEGRMQ LDGNADFLDG VAPEPEALAL HGLDRAQARK EVVALMEARG RLRAIEPNTH
AVPHGDRSGV VIEPYLTDQW YVNVKPLAER ALQAVRDGQT KFVPENYEKI FFQWLTNIEP
WCISRQLWWG HQIPVWYDDE GGIFVAESEE EARAAAEAQR GRPVALTRDA DVLDTWFSSA
LWPFSTLGWP DSTQELARYY PTNTLVTGKD ILFFWVARMM MMGLHLTDRA PFETVYLHTL
VRDASGAKMS KSKGNVVDPL ELIDQVGADV LRFTLCALAV QGRDIKLSTD RVQGYRNFAT
KLWNAARFAE LNGCRLDPAF DPRSATGAIN RWALTEAARA VDEVTGALEA FRFNDAAAAA
YRFVWNIFCD WYLELAKPVL QGEGVDPAIR AETQASVAFL IDQVAKLLHP FMPFLTEELW
AIKGADLPER GLLTLAAWPD LGGLADAAAE AEVGFVVDLV SQIRSARSET NVPAGAQIPL
VMVGAAPEVR ARAEAWRDTL LRLARLSEIT FAETPPKNSV QLLVRGSVAA LPLEGVVDLA
AEVARLRKEQ GKAQGEIKKI DAKLGNADFV ARAPEEIIEE NRERRESESA RLAKIEEALV
RLSGD
|
|---|
| |