Gene Mrad2831_5260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5260 
Symbol 
ID6141331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5580752 
End bp5581261 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content72% 
IMG OID641630964 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001757894 
Protein GI170751634 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.232851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGAGA TCGCCGCCCT GATCGAACCG CAGATCCCGG CCCTGCGGCG CTACGCGGTC 
GCGCTGCTTC GGGATCGCGA AGCGGCGGAC GACCTCGTCC AGGACACCCT GGAGCGGGCA
TTGTCCGCTT GGTCCGGGCG TCGCCGCGAC GGCGACCTGC GGGCGTGGTT GTTCACGATC
GAGCGCAACC TGTTCCTGGC CGCCGTCCGG CGCCGGGGCC GGCGCGGCGC CGATCTCGGC
GCGGAAGCGT TGGAGCAGGT GCCGGATCCG AGCGCCGACC CGGGGGCAGC TTTGGGAGCC
CGCGACGTGC TCGCCGGGCT CGACACCCTG CCCGAGGAGC AGCGCTCGGT GCTGCTCCTC
GTGGCGGTGG AGGACCTGTC CTATGCCGAG GCGGCACAGG TGCTCGGGGT GCCGCTCGGC
ACGGTGATGT CGCGATTGAG CCGGGCGCGC ACGCGGATGC GCGGATTTCT GGAGACGGGC
CGGACAGGCC TGCTGAGGAG GGTTAAATGA
 
Protein sequence
MDEIAALIEP QIPALRRYAV ALLRDREAAD DLVQDTLERA LSAWSGRRRD GDLRAWLFTI 
ERNLFLAAVR RRGRRGADLG AEALEQVPDP SADPGAALGA RDVLAGLDTL PEEQRSVLLL
VAVEDLSYAE AAQVLGVPLG TVMSRLSRAR TRMRGFLETG RTGLLRRVK