Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5038 |
Symbol | |
ID | 6141106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 5351427 |
End bp | 5353016 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641630746 |
Product | phytoene desaturase |
Protein accession | YP_001757679 |
Protein GI | 170751419 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.710499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTCAGT CTGGGGACGG GTTGCGGGCG CTGACCGGAC GCCGGGTGGC CGTGGTCGGG GCTGGGCCGG GCGGACTGGC CGCCGCCCTG CTGCTCGCGC GGGCCGGGAT CCACGTCACC ATCTTCGAGA AGGACCCGCA GGTCGGGGGT CGGACGAAGA CCGTCGAGGC GCCCGGCGGC TACCGGTTCG ATATCGGCCC GACCTTCTTC CTCTATCCAC AGATTCTCGC GGACATCTTC GCGAGCTGCG GCGAGCGGCT GGAGGAGCAC GTCAAGCTCG AGCGGCTCGA CCCGCAGTAC CACCTCGTGT TCGAGGGCGC GGAGGGCATC ACGGGGACGA TCAGCGCCAC CGGTGACGTC GAGCGCCTGG AGCGCGAGAT CGCCCGCCTC GCGCCGGACG ACGCCAAGAA CGTCAAAGAC TTCTTCGCCG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTCCTCGA GCAAGCCTTC CACACCCTGC GCAGCATGGC GAGTCCGGCC ATGCTGGCCG CCCTGCCCTA CCTGCATCCG GGTCGGAGCG TCGACCGCGA CCTGAAGCGA CACTTCGCCG ACCCGCGGGT GCGGCTCGCC TTCTCGTTCC AGACCAAATA CCTCGGGATG TCGCCGTTCC GGTGCCCGAG CCTGTTCACC ATCCTGTCGT TCCTCGAATA CGAGCACGGC GTCTACCACC CGGTGGGCGG CTGCGGCGCC GTCTCCGAGG CGATGGCGGG CCTGGCCGGC CGCATGGGCG TCGATCTCCG GCTCAACAGC AACGTCGAGG AAGTGCTGTT CGACGGCAAG CGCGCCAGCG GTCTCGTGGC GGACGGTGAG ACCTTCAACG CCGACGCGGT GCTGATCAAC GGCGACTTCG CGAAGGTCGT CCGCGCCCTC GTCCCGGAGC GGCACCGGCC GCGCTGGCGC AATGCCAAGA TCCGGAAGGC CCGGCTCTCC TGCTCGACCT TCATGCTGTA TCTCGGCCTC GAGGGGAAAA TGCCCGACAG CCTCGGGCAC CACACGATCC TCCTGGCCGA CGGCTACGAG AAGAACATCC GCGAGATCAC CGAGGGCACG CTGCCGATGC AGCCGTCCCT GTACGTGCAG CACGCGGGCT ACACCGATGG CGGCATGGCG CCGCCCGGAC ACACGGCCCT CTACGTGCTG GTGCCGGTGC CCAACCTGAA GGCGGGGATC GACTGGGCGG CGATGCGCGA GACCTACCGC GCCCTGATCC TGGACCGGCT GAAGCTCCTC GGGATCGACG ATCTCGAGTC CCGCATCCGC TACGAGCGGA TCATCGACCC GACCCAGTGG GAAGAGGATT TCGCCGTCCA CGAGGGCGCC ACCTTCAACC TCGCCCACGA CCTCCTGCAG ATGCTGTATT TCCGGCCGCA CAACCGCTTC GGACCGGGCC TCTACATCGT CGGCGGCGGC ACCCATCCGG GCTCCGGCCT GCCGGTGATC TACGAGGGCG CCCGCATCTC CGCCCGGCTG CTGATCGAGG AACTGGCGGG CGCCCGCGCC GCCGCCGCGG CCGGCATCCC CGATACCGCC CCGCTGGCGA CCTCCGGCGA GGCCTCGTGA
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Protein sequence | MLQSGDGLRA LTGRRVAVVG AGPGGLAAAL LLARAGIHVT IFEKDPQVGG RTKTVEAPGG YRFDIGPTFF LYPQILADIF ASCGERLEEH VKLERLDPQY HLVFEGAEGI TGTISATGDV ERLEREIARL APDDAKNVKD FFAENRTKLN YFKPVLEQAF HTLRSMASPA MLAALPYLHP GRSVDRDLKR HFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA VSEAMAGLAG RMGVDLRLNS NVEEVLFDGK RASGLVADGE TFNADAVLIN GDFAKVVRAL VPERHRPRWR NAKIRKARLS CSTFMLYLGL EGKMPDSLGH HTILLADGYE KNIREITEGT LPMQPSLYVQ HAGYTDGGMA PPGHTALYVL VPVPNLKAGI DWAAMRETYR ALILDRLKLL GIDDLESRIR YERIIDPTQW EEDFAVHEGA TFNLAHDLLQ MLYFRPHNRF GPGLYIVGGG THPGSGLPVI YEGARISARL LIEELAGARA AAAAGIPDTA PLATSGEAS
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