Gene Mrad2831_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5038 
Symbol 
ID6141106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5351427 
End bp5353016 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content69% 
IMG OID641630746 
Productphytoene desaturase 
Protein accessionYP_001757679 
Protein GI170751419 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.710499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCAGT CTGGGGACGG GTTGCGGGCG CTGACCGGAC GCCGGGTGGC CGTGGTCGGG 
GCTGGGCCGG GCGGACTGGC CGCCGCCCTG CTGCTCGCGC GGGCCGGGAT CCACGTCACC
ATCTTCGAGA AGGACCCGCA GGTCGGGGGT CGGACGAAGA CCGTCGAGGC GCCCGGCGGC
TACCGGTTCG ATATCGGCCC GACCTTCTTC CTCTATCCAC AGATTCTCGC GGACATCTTC
GCGAGCTGCG GCGAGCGGCT GGAGGAGCAC GTCAAGCTCG AGCGGCTCGA CCCGCAGTAC
CACCTCGTGT TCGAGGGCGC GGAGGGCATC ACGGGGACGA TCAGCGCCAC CGGTGACGTC
GAGCGCCTGG AGCGCGAGAT CGCCCGCCTC GCGCCGGACG ACGCCAAGAA CGTCAAAGAC
TTCTTCGCCG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTCCTCGA GCAAGCCTTC
CACACCCTGC GCAGCATGGC GAGTCCGGCC ATGCTGGCCG CCCTGCCCTA CCTGCATCCG
GGTCGGAGCG TCGACCGCGA CCTGAAGCGA CACTTCGCCG ACCCGCGGGT GCGGCTCGCC
TTCTCGTTCC AGACCAAATA CCTCGGGATG TCGCCGTTCC GGTGCCCGAG CCTGTTCACC
ATCCTGTCGT TCCTCGAATA CGAGCACGGC GTCTACCACC CGGTGGGCGG CTGCGGCGCC
GTCTCCGAGG CGATGGCGGG CCTGGCCGGC CGCATGGGCG TCGATCTCCG GCTCAACAGC
AACGTCGAGG AAGTGCTGTT CGACGGCAAG CGCGCCAGCG GTCTCGTGGC GGACGGTGAG
ACCTTCAACG CCGACGCGGT GCTGATCAAC GGCGACTTCG CGAAGGTCGT CCGCGCCCTC
GTCCCGGAGC GGCACCGGCC GCGCTGGCGC AATGCCAAGA TCCGGAAGGC CCGGCTCTCC
TGCTCGACCT TCATGCTGTA TCTCGGCCTC GAGGGGAAAA TGCCCGACAG CCTCGGGCAC
CACACGATCC TCCTGGCCGA CGGCTACGAG AAGAACATCC GCGAGATCAC CGAGGGCACG
CTGCCGATGC AGCCGTCCCT GTACGTGCAG CACGCGGGCT ACACCGATGG CGGCATGGCG
CCGCCCGGAC ACACGGCCCT CTACGTGCTG GTGCCGGTGC CCAACCTGAA GGCGGGGATC
GACTGGGCGG CGATGCGCGA GACCTACCGC GCCCTGATCC TGGACCGGCT GAAGCTCCTC
GGGATCGACG ATCTCGAGTC CCGCATCCGC TACGAGCGGA TCATCGACCC GACCCAGTGG
GAAGAGGATT TCGCCGTCCA CGAGGGCGCC ACCTTCAACC TCGCCCACGA CCTCCTGCAG
ATGCTGTATT TCCGGCCGCA CAACCGCTTC GGACCGGGCC TCTACATCGT CGGCGGCGGC
ACCCATCCGG GCTCCGGCCT GCCGGTGATC TACGAGGGCG CCCGCATCTC CGCCCGGCTG
CTGATCGAGG AACTGGCGGG CGCCCGCGCC GCCGCCGCGG CCGGCATCCC CGATACCGCC
CCGCTGGCGA CCTCCGGCGA GGCCTCGTGA
 
Protein sequence
MLQSGDGLRA LTGRRVAVVG AGPGGLAAAL LLARAGIHVT IFEKDPQVGG RTKTVEAPGG 
YRFDIGPTFF LYPQILADIF ASCGERLEEH VKLERLDPQY HLVFEGAEGI TGTISATGDV
ERLEREIARL APDDAKNVKD FFAENRTKLN YFKPVLEQAF HTLRSMASPA MLAALPYLHP
GRSVDRDLKR HFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA
VSEAMAGLAG RMGVDLRLNS NVEEVLFDGK RASGLVADGE TFNADAVLIN GDFAKVVRAL
VPERHRPRWR NAKIRKARLS CSTFMLYLGL EGKMPDSLGH HTILLADGYE KNIREITEGT
LPMQPSLYVQ HAGYTDGGMA PPGHTALYVL VPVPNLKAGI DWAAMRETYR ALILDRLKLL
GIDDLESRIR YERIIDPTQW EEDFAVHEGA TFNLAHDLLQ MLYFRPHNRF GPGLYIVGGG
THPGSGLPVI YEGARISARL LIEELAGARA AAAAGIPDTA PLATSGEAS