| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4473 |
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| Symbol | |
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| ID | 6140539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 4750526 |
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| End bp | 4753684 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641630187 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001757122 |
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| Protein GI | 170750862 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.201068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.145004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCT TCTTCATCGA CCGCCCGGTC TTCGCCTGGG TGGTGGCGCT GTTCATCTGC
CTGGGCGGCG CCCTCGCGAT CCCGAACCTG CCGGTGGCGC AGTACCCGGT GATCGCGCCC
CCCTCCATCG CCCTGTCCAC GGCCTATCCG GGGGCCTCGG TGGAGAGCCT CTACATCGGC
ACGACCCGGC TCATCGAGGA TGAGCTCAAC GGCGCCGCCA ACATCATGAG CTTCGAGTCG
ACCACCGACT CGTTCGGCTC GGTCAACATC ACCGCCACCT TCCAGCCGGG CACCGACCCG
TCGCTCGCCT CGGTCGAGGT GCAGAACCGG CTGAAGCGCG TCGAGGCGCG CCTGCCCGCG
GAAGTGCGCC AGCAGGGCAT CCTGGTGGAG GAGGCCTCGG CCGCGACCCT CAACATCATC
ACCCTCGTCT CCACCGACGG GTCGATGGAC GAGGTCGGCC TCGGCGACTT CCTGATCCGC
AACGTCATCA ACGAGATCCG GCGCATCCCC GGGGTCGGGC GCGCGACGCT CTACTCCACC
GAGCGGTCGC TGCGCGTCTG GGTCGATCCC GACAAGCTGC GCGGCCTCTC GCTCAGCGCC
TCGGACGTCA CCGACGCGAT CCGCAACCAG AACGTCCAGG TCGCCTCCGG GTCGGTCGGC
GCGCAGCCGA GCCCGACCCG GCAGGCGCTC ACCGTGCCGA TCATCGTGAA GGGCCAGCTC
GGCACGATCG AGGAGTTCGG CGCCATCGTG CTGCGGGCCA ATCCCGACGG CTCGAACGTG
CGCCTGCGCG ACGTCGCCCG GATCGAGCTC GGCGGTGACG CCTACCAGTT CTCGACCCGC
CTCAACGGCG GCCCCGCCGC CGGCATCTCG GTGACGCTCG CCCCCGACGG CAACGCGCTC
GAGACCGCCA AGGCGATCCG CGCCAAGATG GTGGAGCTGT CCCAGTTCTT CCCGCCGGAC
CTGAAGTGGG ACATCCCCTA CGACATCACC CCGGCGGTGG AGGCCTCCAT CGAGAAGGTG
CTGCACACGC TCGTCGAGGC GGTGGTGCTG GTCTTCCTCG TGATGTTCCT GTTCCTGCAG
AACATCCGCT ACACCCTGAT CCCCACCATC GTGGTGCCGA TCGCCCTCAT GGGCACCGTC
ACGGTGATGT GGATCTCGGG CTTCTCGGTG AACGTGCTCA CCATGTTCGG CATGGTGCTG
GCCATCGGCA TCCTGGTCGA CGACGCCATC GTGGTGGTCG AGAACGTCGA GCGGATCATG
AACGAGGAGG GGCTGCCCCC CAAGGAGGCC ACCAAGAAGG CCATGGGGCA GATCACCGGC
GCGATCATCG GCATCACCCT GGTGCTGGTG GCGGTGTTCA TCCCGATGGC GTTCTTCCCC
GGCTCGGTGG GCATCATCTA CCGACAGTTC TCGATCGCGA TGGTGACCTC CATCGCCTTC
TCGGCGCTGC TCGCCCTGTC GCTGACGCCG GCGCTCTGCG CGACCTTCCT GAAGCCGATC
GAGAAGGGCC ACGGCCACGC CAAGGGCGGC GTGTTCGGGA TGTTCAACCG GTTCGTCGAC
CGGGAGACCG CCCGCTACGG CCGCGGCACC GCGGCGTTCA TCCGGAAGTC CGGTCGGGTG
ATGCTGGTCT ACGTCGCGCT CGTGGCGGGC ACGGCCTACG CCTTCGTCAA CCTGCCGGAG
GGCTTCCTAC CGGTGGAGGA CCAGGGCTTC TTCACGGTCG ACGTCCAGAC GCCCCCGGGC
GCCTCCTACA ACCGCACCCA GGAGGCGGTG CGCAAGGTCG AGGAGCACCT GCTGGCGCAG
CCCGGCGTCG CCACCGTGAC GATGCTGAAC GGCTTCTCGT TCTCCGGCCA GGCCCCGAGC
ACCAGCCAGG CCTTCGTGAC CCTGAAGCCC TGGTCCGAGC GCGACGCCAA GAACTCGGCC
GCCGCCCTCG TGGCCGGCAC CAACGCGGCG CTCGCCAGCT ACCGCGACGC CACGGTGGAC
GCCCAGGAGC CGCCGCCGGT CGACAACCTC GGCAACGCGG CGGGCTTCTC GTTCCGCCTC
CAGGACCGGG CCAACCGCGG CTACGCGGCC CTGCTGTCAG CCCAGGAGCA GTTGCTGAAG
CTCGCGCAGC AGAGCCCGAT CCTCCAGAAG GTGAAGATCG AGGGCCTGCC GCCGACCCCG
CAGGCGGAGC TGGTCATCGA CCGCGAGAAG GCGGCGGCGC TCGGCGTGAA GTTCGAGGAC
ATCAACAACA CGATCCAGCT CAACCTCGGC TCGGTCTACC CGAACGACTT CCCCAACCGC
GGCAAGATGC AGCGCGTCTA CGTCCAGGCC GAGCAGCTCC AGCGCATGAA CGCGGCGGAC
ATCCTCAACT ACGCGGTGAA GAACGCCACC AACACGATGG TGCCGATGTC GTCCTTCGCG
GAGCTGAAAT GGAGCATGGG GCCGAGCCAG ATCGTCGGCT TCAACGGCTA CCAGTCGGTG
CGCTTCACCG GCGAGCCGAA CCCCGGCTAC ACGTCGGGCG ACGCGATCGC CGAGATGGAG
CGGCTGATGC TGCAGCTGCC CAAGGGCTTC GGCTACGCCT GGACGGGCCA GTCCTACCAG
GAGAAGCAGG CGGGCAGCCA GGCGAGCCTG CTGCTCGCCC TGTCGGTGCT GATCGTGTTC
CTGTGCCTCG CCGCGCTCTA CGAGAGCTGG GCGATCCCGG TCTCGGTGAT GCTGGTGATC
CCGCTCGGCG TCATCGGCGC GGTGGCGGCC GTGTACCTGC GCGGCATGCC CAACGACGTG
TACTTCAAGA TCGGGCTGAT CACGATCATC GGCCTCTCGG CCAAGAACGC GATCCTGATC
GTGGAGTTCG CCCGCGACCT CTGGAAGCCC GGCACCTCCG TGGTGCGGGC GGCGATCGAG
GCCGCGACGC TCCGGTTCCG GCCGATCGTG ATGACCTCGC TCGCCTTCAT CTTCGGCGTG
GTGCCGCTGG CCATCGCCAC CGGCGCCGCC TCGAAGAGCC AGCAGGCGAT CGGCACCGGC
GTGATGGGCG GCATGATCAC CGCGACCGTG CTGGCGGTGT TCTTCGTGCC GGTGTTCTTC
GTCGTCGTCA TGCGCCTGTT CCGGCGCAAG GCGGTGGCGG AGGGCGAGCG GGCCGAGGCG
GAGACGCGGC ACGAGCCGGC GCGCGTGGCG GCCGAGTAG
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| Protein sequence | MARFFIDRPV FAWVVALFIC LGGALAIPNL PVAQYPVIAP PSIALSTAYP GASVESLYIG
TTRLIEDELN GAANIMSFES TTDSFGSVNI TATFQPGTDP SLASVEVQNR LKRVEARLPA
EVRQQGILVE EASAATLNII TLVSTDGSMD EVGLGDFLIR NVINEIRRIP GVGRATLYST
ERSLRVWVDP DKLRGLSLSA SDVTDAIRNQ NVQVASGSVG AQPSPTRQAL TVPIIVKGQL
GTIEEFGAIV LRANPDGSNV RLRDVARIEL GGDAYQFSTR LNGGPAAGIS VTLAPDGNAL
ETAKAIRAKM VELSQFFPPD LKWDIPYDIT PAVEASIEKV LHTLVEAVVL VFLVMFLFLQ
NIRYTLIPTI VVPIALMGTV TVMWISGFSV NVLTMFGMVL AIGILVDDAI VVVENVERIM
NEEGLPPKEA TKKAMGQITG AIIGITLVLV AVFIPMAFFP GSVGIIYRQF SIAMVTSIAF
SALLALSLTP ALCATFLKPI EKGHGHAKGG VFGMFNRFVD RETARYGRGT AAFIRKSGRV
MLVYVALVAG TAYAFVNLPE GFLPVEDQGF FTVDVQTPPG ASYNRTQEAV RKVEEHLLAQ
PGVATVTMLN GFSFSGQAPS TSQAFVTLKP WSERDAKNSA AALVAGTNAA LASYRDATVD
AQEPPPVDNL GNAAGFSFRL QDRANRGYAA LLSAQEQLLK LAQQSPILQK VKIEGLPPTP
QAELVIDREK AAALGVKFED INNTIQLNLG SVYPNDFPNR GKMQRVYVQA EQLQRMNAAD
ILNYAVKNAT NTMVPMSSFA ELKWSMGPSQ IVGFNGYQSV RFTGEPNPGY TSGDAIAEME
RLMLQLPKGF GYAWTGQSYQ EKQAGSQASL LLALSVLIVF LCLAALYESW AIPVSVMLVI
PLGVIGAVAA VYLRGMPNDV YFKIGLITII GLSAKNAILI VEFARDLWKP GTSVVRAAIE
AATLRFRPIV MTSLAFIFGV VPLAIATGAA SKSQQAIGTG VMGGMITATV LAVFFVPVFF
VVVMRLFRRK AVAEGERAEA ETRHEPARVA AE
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