| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4369 |
|---|
| Symbol | |
|---|
| ID | 6140428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4633713 |
|---|
| End bp | 4634723 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641630076 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001757018 |
|---|
| Protein GI | 170750758 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.395887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.634457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG GCGTGAGCGG CACCCCCCTC CTGTCGATCG AGAGCCTGCA GGTCCATTTC
CGCACCCCCG ACGGGGTGAA CCGGGCGGTG GACGGGGTCT CGTTCGCGAT CCAGTCGGGC
GAGACCCTGG CGATCGTGGG CGAGTCCGGC TGCGGCAAGT CGGTGACCTC GATGTCGATC
CTGCGGCTCC TGCCCGAGCC GCCGGCCCGC ATCGCCGGCG CGATCAAGTT CGAGGGCAGG
AACCTGCTCG ACCTGCCGAA CAGCGCCATG CGCAAGATCC GCGGCAACGA CATCAGCGTG
ATCTTCCAGG AGCCGATGAC CTCGCTGAAC CCGGTGCTGA CGGTCGGCCG CCAGATCGGC
GAGACCCTGC GGCTGCACCA GGGCCTCGGC CGCCGGGAGG CCGAGGAGCG GGCGGTGGAG
ATGCTGACCC TCGTCGGCAT CCCCGAGCCG CGGCGCCGGG TGCGGGAATA CCCGCACCAG
CTCTCCGGCG GCATGCGCCA GCGGGTGATG ATCGCCATCG CGCTCGCCTG CTCGCCGAAA
CTCCTGATCG CCGACGAGCC GACCACGGCG CTCGACGTGA CCATCCAGGC CCAGATCCTC
GACCTGATGC GCGACCTGAA GGCCCGGGTC GGCGCCGCCA TCATGCTGAT CACCCACGAT
CTCGGCGTGG TCGCCGAGGT CGCCGACCGG GTGGTGGTGA TGTATGCCGG CCGCAAGGTC
GAGGAGGCGC CGGTCCGCGA CCTGTTCCGG TCGCCGCGCC ACCCCTACAC CCGCGGTCTG
ATGGGGGCGG TGCCGAAGCT CGGCGCCGTC GAGCACGGCG CCGACGCGCG GCTCGCCGAG
ATCCCCGGCA TGGTGCCGAG CCTCAAAGGT CGGATCGAGG GCTGCGTCTT CGCCGGGCGC
TGCCCGGACG TGACCGACCT GTGCCGCGCC TACGCGCCGG CCCTGGAGCC GAAGGCGCCG
GGCCACCTCG CCGCCTGCCA CTACGCGCCG AAGGACGCCC TCGCGGCATG A
|
|---|
| Protein sequence | MSTGVSGTPL LSIESLQVHF RTPDGVNRAV DGVSFAIQSG ETLAIVGESG CGKSVTSMSI
LRLLPEPPAR IAGAIKFEGR NLLDLPNSAM RKIRGNDISV IFQEPMTSLN PVLTVGRQIG
ETLRLHQGLG RREAEERAVE MLTLVGIPEP RRRVREYPHQ LSGGMRQRVM IAIALACSPK
LLIADEPTTA LDVTIQAQIL DLMRDLKARV GAAIMLITHD LGVVAEVADR VVVMYAGRKV
EEAPVRDLFR SPRHPYTRGL MGAVPKLGAV EHGADARLAE IPGMVPSLKG RIEGCVFAGR
CPDVTDLCRA YAPALEPKAP GHLAACHYAP KDALAA
|
|---|
| |