| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4103 |
|---|
| Symbol | |
|---|
| ID | 6140161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 4356097 |
|---|
| End bp | 4356972 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641629813 |
|---|
| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| Protein accession | YP_001756756 |
|---|
| Protein GI | 170750496 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
|---|
| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.404026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGG CCGGCAAGCC CCATTCCGAT CTCGCCCATT CCGATCTCGC CCAGACCATC
GAAGCCGCCT GGGAAGACCG CGCCAACGTG TCGACTGCCA CCAAGGGCGC GGTGCGCGAG
GCGGTCGAGG CGGCCCTGGA GCTGCTCGAT TCGGGCAAGG CCCGCGTCGC CGAGAAGTCC
GGCAACCGCG ACTGGGTGGT GAACCAGTGG CTGAAGAAGG CGGTGCTGCT CTCCTTCCGC
CTCAACGACA TGGCGACGAT CGAGGGCGGC CCCGGCGGCG CGCCCTGGTG GGACAAGGTC
GCGTCGAAAT TCGCCGGCTG GGGCGAGGCC GAGTTCCGCG CCGCGGGCCT GCGCGCCGTC
CCAGGCTGCT TCGTCCGCCG GGGCTCCTAC ATCGCCCCCG GCGCCGTGCT GATGCCGAGC
TTCGTCAATC TCGGCGCGCA TGTCGGCGAG GGCACGATGG TCGACACCTG GGTGACGATC
GGCTCCTGCG CGCAGGTGGG GAAGAACTGC CACATCTCGG GCGGTGCCGG CATCGCGGGC
GTTCTGGAGC CGCTGCAGGC GAACCCGGTG ATCATCGAGG ACGACTGCTT CATCGGCGCC
CGCGCCGAGG TGGCGGAGGG CGTCATCGTC GGCCAGGGTA GCGTCCTGTC CATGGGCGTC
TATATCGGCG CCTCCACCAA GATCGTCGAC CGGACCACCG GCGAGGTCAT GTACGGCCGG
GTGCCGCCCT ACTCGGTGGT CGTCTCGGGC ACGATGCCCG GCAAGGCGCT GCCGGACGGC
ACGCCGGGCC CGGGCCTCTA CTGCGCGGTG ATCGTCAAGC GCGTCGATGC CGGCACGCGG
TCCAAGACCG CCATCAACGA GCTGCTGCGC ACCTGA
|
|---|
| Protein sequence | MSQAGKPHSD LAHSDLAQTI EAAWEDRANV STATKGAVRE AVEAALELLD SGKARVAEKS
GNRDWVVNQW LKKAVLLSFR LNDMATIEGG PGGAPWWDKV ASKFAGWGEA EFRAAGLRAV
PGCFVRRGSY IAPGAVLMPS FVNLGAHVGE GTMVDTWVTI GSCAQVGKNC HISGGAGIAG
VLEPLQANPV IIEDDCFIGA RAEVAEGVIV GQGSVLSMGV YIGASTKIVD RTTGEVMYGR
VPPYSVVVSG TMPGKALPDG TPGPGLYCAV IVKRVDAGTR SKTAINELLR T
|
|---|
| |