| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4081 |
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| Symbol | trmE |
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| ID | 6140139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 4333634 |
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| End bp | 4334959 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641629791 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001756734 |
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| Protein GI | 170750474 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0162579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA CCGACACGCT CTTCGCCCCG GCCAGCGGCT TCGGCCGGGC CGCCGTCGCG
GTCATCCGCA TCAGCGGCCC GGCCGCGGGC GGCGTGCTCG CCACCCTGGG CGGCCGCCTG
CCGACCCCGC GGCGGCTGTC CCTGCGGAGC CTCAGGGATC CGCGGGACGG CACCGAGCTC
GACCGGGCGC TGGTGGCGTG GTTTCCCGGG CCGGACACCT ACAGCGGCGA GGATATGGCG
GAGCTGCACC TCCACGGCGG CGCGGCCGTG CGGATGCGCG TCCTCGCGAC CCTCGCCCGC
CTTCCCGGAT GCCGGGCGGC CGAGCCCGGG GCGTTCACGC GGCGGGCGGT CCTCAACGGC
CGGATGGATC TCGCCGAGGC GGAGGCCGTC GCCGACCTGA TCGACGCCGA GACCGAGGGC
CAGCGCCGGC AGGCCCTGCG CCAGCTCGAC GGCGCGCTCA GCCGGCAGGT GGCCGCGTGG
CGCGCGGAGG CGATCGACTG CCTCGCCGCC GCGGAGGCCG CGCTCGACTT CGCCGACGAG
GGGGACGTGG ACGATGCCGG GCTCGACGCC GCGCTGTTCG ACCGCGCCGC GCGCCTGCGG
GACGCGGTCG CCGCGACGCT GCGCGACGGC CACCGCGGCG AGCGCCTGCG CGAAGGATTC
ACGGTGGTGC TGGCGGGGGC GCCCAACAGC GGGAAGTCGA CGCTGCTGAA CGCCCTGAGC
CGGCGGGACG TCGCCATCGT GTCGGACAGC CCGGGGACGA CCCGGGACGC CATCGAGGTG
CGGCTCGACC TCGGCGGCCT GCCGGTCCTC CTGGTCGACA CGGCCGGGCT CCGCGAGACC
GCGGAGCCAA TCGAGGCGCA GGGCATCGTG CGGACCCGGG CGCGGATCGA CACGGCCGAT
CTGGTGGTCG CCCTCGTGCC CCCCGGCGGT GCTGTCCCGG ATCTCGGGCC GGGATGCCGT
CCGATCCTGA TCGTCCGCAC GAAGGCCGAT CTTTTTGCCG GCTCACAGCC CGCCGGCGAC
TCGGCCGACG TGACGGTCTC GGCCCATACC GGCGCCGGCA TGGACGACCT GCTCGACGCG
ATCCAGGCCG CGGCCGAGGA CGGTCTCGGC ACCGGCGACG CACTGATCAC CCGCGCCCGT
CACAGGGCCG CGCTCGAGGC CTGCGTGGCC CATCTCGACC GCGTCTCCGG GAGCGCCGGC
GGTCTGCCGG AGCTGGCCGC GGAGGACCTG CGGCTCGCGG TCCGGGCGCT GGGCGAGGTG
GCCGGCCATG TCGGCGTCGA GGACGTCCTC GACCGGCTGT TCAGCGGCTT CTGCATCGGG
AAGTAG
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| Protein sequence | MNETDTLFAP ASGFGRAAVA VIRISGPAAG GVLATLGGRL PTPRRLSLRS LRDPRDGTEL
DRALVAWFPG PDTYSGEDMA ELHLHGGAAV RMRVLATLAR LPGCRAAEPG AFTRRAVLNG
RMDLAEAEAV ADLIDAETEG QRRQALRQLD GALSRQVAAW RAEAIDCLAA AEAALDFADE
GDVDDAGLDA ALFDRAARLR DAVAATLRDG HRGERLREGF TVVLAGAPNS GKSTLLNALS
RRDVAIVSDS PGTTRDAIEV RLDLGGLPVL LVDTAGLRET AEPIEAQGIV RTRARIDTAD
LVVALVPPGG AVPDLGPGCR PILIVRTKAD LFAGSQPAGD SADVTVSAHT GAGMDDLLDA
IQAAAEDGLG TGDALITRAR HRAALEACVA HLDRVSGSAG GLPELAAEDL RLAVRALGEV
AGHVGVEDVL DRLFSGFCIG K
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