| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4074 |
|---|
| Symbol | |
|---|
| ID | 6140132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 4324637 |
|---|
| End bp | 4326505 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641629784 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001756727 |
|---|
| Protein GI | 170750467 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA CACGCGCCCG CCGGAGCGTT TCGGCGCTCG CCCTGCTGCT CGCCGCCGGG
CTTCCGCAGA CCGTGCTCGC GGCGCAGCCG AAGGAATCGA CCCCGGTGCT CGACTACGAG
CCCGCGGACT CGCTCGAGGG CAACTTCCTC TCCGCCTACA TCGCGGGCGC GTCGCGGGAC
ACGGCGGCGG CGGCGACCTT CTACCGCGAG GCGGTGAAGG CCGACCCGCG CAACGCGGAA
CTCGTCGAGC GCGCCTTCAT CTCGCTCCTG GCCGACGGTG CCCTGCCGGA CGCGTTCCGC
ACCGCCGAGA AGCTGATCGC CCGCGATCCG ACCAACGGCC TCGCCAACCT CTCCCTCGGG
GTGCGCCAGA TCAAGGCCGG CCAGTGGGCC GCCGCTCGCC AGAACTTCTC CCGGAGCGGC
CGGGGTGCTG CGACCGACCT GACCGCGACG CTGCTGACCG CGTGGTCCTA CGCGGGCGCG
GGCGACGGCA AGAAGGCGCT GGAGACGGTC AACAAGCTCC GGGGCGAGCG CTACTACAAC
ACCTTCCGCG ACTACCACGC CGGCCTGATC GCCTCGGTGA CCGGCGACAA CGCCGAGGCC
GAGCGCCGGC TCAAGGCCGC CTACGACGCC GACCACAACA CCCTGCGCAT CGTCGACGCC
TACGCCCGGA TGGAGGCCAG CCTCGGCCGC ACCGACCTGG CGATCCAGGC CTATTCCGAC
TTCGACCAGC TCTCGCCGCG CCACCCGCTC GTGCGCGACG CCCTCGAGAA GCTGAAGGAG
GGCAAGCCGC TCACCCGGCT GATCGGCACC GCCCAGGAGG GCGCCGCCGA GGTGCTGTAC
GGGCTCGGCT CGGCCGGCTC GACCCAGGGC GACGAGCTGC CCGCGGTGAT CTACCTGCGG
CTGGCGCTCT ACCTCGCCCC CGACCACGCC CTCGCGCGGC TGACGCTCGC CGACACGCTG
GACCGGATGA AGCAGCCCGA GCGCGCCAAC GAGGCCTACG CGCAGATCCC GGCCAACTCC
CCGCTCAAGC TCAACGCCGA CATCCAGATC GGCCTGAACC TGGAGCAGAT GGGCAAGGGC
GACGAGGCGC TCGCCCATCT CGACGCGGCG ATGAAAGCCC ACCCGGACGA CATCGACGTC
ATCACGGCGC TCGGCAACGT CCAGCGCGCC CGCAAGAAGT ACGAGGAGGC GGCGGCCACC
TACACCCGCG CCATCGACCT GATCGGCGAC CGGCCGCAAT CCAACTACTG GACGACCTAC
TATTTCCGCG GCACCGCCTA CGAGCGCGCC AAGCAGTGGC CGAAGGCCGA GGCCGACCTG
AAGAAGGCCC TGTCGCTGGT GCCCGCCAAC CAGCCCGCCG CCAAGGCGCA GGTGATGAAC
TACCTCGGCT ATTCCTGGGT CGACCAGAAC ATCAACATCG ACGAGGCGTT CAAGCTGCTG
CAGCAGGCCG CCGACGCGAG CCCCCGGGAC GGCATGATCG TCGACAGCCT CGGCTGGGCC
TATTACCGCC TCGGCCGCTG GGACGACGCG GTGCGCGAGC TGGAGAAGGC GGTCGAGCTG
AAGCCCGGCG ATCCGACCAT CAACGACCAC CTCGGCGACG CCTACTGGCG CTCGGGCCGG
CGCCTCGAGG GCAAGTTCCA GTGGCAGCAC GCCAAGGACC TGAACCCCGA GCCGGACGAC
CTCGCGCAGA TCAACGCGAA GCTGAAGGAC GGGCTGCCCG ACATCGAGAA GCCGACCGCC
ACCGCCGAGA CGGTGCCGGC CCCGGTCGCC GCCCCGCACA ACGCCGAGAA CCCGGAGCTG
CCGAAGGGCG CGCCCCAGCC GCACGAGGCG CCGGGCTCGG CCGACAAGGC CAAGAAATCG
GGGGGCTAG
|
|---|
| Protein sequence | MMMTRARRSV SALALLLAAG LPQTVLAAQP KESTPVLDYE PADSLEGNFL SAYIAGASRD
TAAAATFYRE AVKADPRNAE LVERAFISLL ADGALPDAFR TAEKLIARDP TNGLANLSLG
VRQIKAGQWA AARQNFSRSG RGAATDLTAT LLTAWSYAGA GDGKKALETV NKLRGERYYN
TFRDYHAGLI ASVTGDNAEA ERRLKAAYDA DHNTLRIVDA YARMEASLGR TDLAIQAYSD
FDQLSPRHPL VRDALEKLKE GKPLTRLIGT AQEGAAEVLY GLGSAGSTQG DELPAVIYLR
LALYLAPDHA LARLTLADTL DRMKQPERAN EAYAQIPANS PLKLNADIQI GLNLEQMGKG
DEALAHLDAA MKAHPDDIDV ITALGNVQRA RKKYEEAAAT YTRAIDLIGD RPQSNYWTTY
YFRGTAYERA KQWPKAEADL KKALSLVPAN QPAAKAQVMN YLGYSWVDQN INIDEAFKLL
QQAADASPRD GMIVDSLGWA YYRLGRWDDA VRELEKAVEL KPGDPTINDH LGDAYWRSGR
RLEGKFQWQH AKDLNPEPDD LAQINAKLKD GLPDIEKPTA TAETVPAPVA APHNAENPEL
PKGAPQPHEA PGSADKAKKS GG
|
|---|
| |