Gene Mrad2831_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3978 
Symbol 
ID6140033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4231811 
End bp4232806 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content78% 
IMG OID641629689 
Productthiamine-monophosphate kinase 
Protein accessionYP_001756635 
Protein GI170750375 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.142445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00138187 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGGCCGGGC CGGCCCGCGC CTCCGAGGAG GGGCTGATCG CCCGCTACTT CGCCCCGCTC 
GCCGGGCCGG GCGCCGACGG GCTCCGGGAC GACGCCGCCG CGCTGACGCC CGCGCCGGGC
CACGACCTCG TCCTCACCGT CGACGCCGTG GTGGCGGGGA TCCACTACTT CGCGGAGGAT
CCGCCGGCCT CGATCGCCCG CAAGGCCCTC GGCGTGAACC TCTCCGACAT CGCCGCCAAG
GGCGCGGTCC CGCGCGGCTT CCTGCTGACC CTGGCGCTCC CCGACGACTG GACGGAGGCC
TGGCTCGACG GCTTCGCGCA GGGGCTCGGC GCGGCGGCCG CGGCGGCCGG CTGCCCGCTG
CTGGGCGGCG ACACGGTGCG CTCCGGTGGG CCGGCGCTGA TCTCGGTGAG CGCGTTCGGC
GAGGTGCCGA CCGGCACCAT CGTGCGGCGC ACCACCGCGC GGGCGGGCGA CCGGATCTGC
GTCACCGGCA CGATCGGCGA CGCCGCCCTC GGCCTGCGGA TGCGCCTGGA GCCCGACGCC
CCCTGGGCGT CAGGCCTCGA CCCGGCGCAG CGGTCCGAAC TCGCCGACCG CTACCTGCAC
CCGCGCCCGC GGCTCGCCGC CGCGCCGGCG GTCCGCCGCC ACGCCACCGC CGCCATGGAC
GTCTCCGACG GCCTCGCGGG GGATCTCGCC AAGATGCTGG GGGCGGGCCG CACCGCCCGG
GTGGCGGTGG CCGACGTGCC GCTCTCGGGG GCCGCCCGGA GCGCCTGCGC AGCGGAGCCC
GCCCTGATCG AGGCGGTCCT GACCGGCGGC GACGATTACG AGATCCTCTG CACCGTCGCG
CCGGAGCGCC TGGAGGATCT CCGGACCGAG GCCGCGGCCG CCGGGATCGC CGTCGCCGCC
ATCGGCACCG TCACCTCAGG CGACGGCCCG CCGCGCTTCG AAATGCGCGA TGGCGCCGAG
CGCGTGTTCG CGGCCGGGGC CTTCAGCCAC TTCTGA
 
Protein sequence
MAGPARASEE GLIARYFAPL AGPGADGLRD DAAALTPAPG HDLVLTVDAV VAGIHYFAED 
PPASIARKAL GVNLSDIAAK GAVPRGFLLT LALPDDWTEA WLDGFAQGLG AAAAAAGCPL
LGGDTVRSGG PALISVSAFG EVPTGTIVRR TTARAGDRIC VTGTIGDAAL GLRMRLEPDA
PWASGLDPAQ RSELADRYLH PRPRLAAAPA VRRHATAAMD VSDGLAGDLA KMLGAGRTAR
VAVADVPLSG AARSACAAEP ALIEAVLTGG DDYEILCTVA PERLEDLRTE AAAAGIAVAA
IGTVTSGDGP PRFEMRDGAE RVFAAGAFSH F