Gene Mrad2831_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3976 
SymbolhppA 
ID6140031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4228890 
End bp4231034 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content70% 
IMG OID641629687 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_001756633 
Protein GI170750373 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.687773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00231033 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTCCCT TGGTCCTGAT CATCGCGGGC GGGCTCTGCG CCGTCGCCTA CGGCATCGTC 
ACGATCCTCG ACGTGATGCG GCGCGACGCC GGCACGCAGC GCATGCAGGA GATCGCCGCC
GCCATCGCCG AGGGCGCGCA GGCCTATCTC CGCCGGCAGT ACACGACGAT CGGCCTCGTC
GGCGTCGTCC TGTTCGTCCT CCTCGCCGTC TTCCTCGGGA TCAAGGTCGC GGTCGGCTTC
CTGATCGGCG CCGTGCTGTC GGGCGCGGCC GGCTTCATCG GCATGAACGT CTCGGTGCGG
GCCAATGTCC GCACCGCCCA GGCCGCCTCG ACCTCGCTGG GCGGCGGCCT CGACGTCGCC
TTCAAGTCGG GGGCGGTGAC CGGCATGCTG GTCGCGGGCC TCGCGCTCCT CGGCGTCGCC
CTCTACTACC TGTTCCTCAC CCGCGCGGCC CATCTCGAGC CGTCGAGCCG CGAGGTGATC
GACGCCCTCG TGGCGCTGGG CTTCGGCGCC TCGCTGATCT CGATCTTCGC CCGCCTCGGC
GGCGGCATCT TCACCAAGGG GGCCGATGTC GGCGGCGACC TCGTCGGCAA GGTCGAGGCC
GGCATCCCGG AGGACGATCC GCGCAACCCC GCCACCATCG CCGACAACGT CGGTGACAAT
GTCGGCGACT GCGCCGGCAT GGCGGCCGAC CTGTTCGAGA CCTACGCGGT GACGGTCGTC
GCCACGATGG TGCTGGCCGC GATCTTCTTC TCGGGCGCGG GCGGCAGTGA CCGAAACGTC
CTCGAGCCGA TGATGCTGTA CCCGCTCGCC ATCGGCTCGG CCTGCATCCT CACCTCCATC
GCCGGCACCT ACGCGGTGCG GCTCGGCGCC AACCAGTCGA TCATGGGCGC CCTCTACAAG
GGGCTGATCG CCGCCGGCGT GCTCTCCATC GCGGCGATCG CGGCGGTCAA CATGACCCTG
TTCGGCGGCT TCTCGACGAG CTTCACCACC TCCACCGGCC TGACCTTCAC GTCGGGCGCC
CTGTTCGGCT GCGCGGTGAT CGGGCTCGCC ATCACGGCGC TGATCGTGGT GATCACCGAG
TACTACACGG GCACCAACTT CCGCCCGGTG AAGTCGATCG CCGACGCGTC GGTGACCGGG
CACGGCACCA ACGTGATCCA GGGGCTGGCG ATCTCGCTCG AATCGACCGC GCTGCCGGCC
ATCGTGATCG TGGCGGGCAT CATCAGCACC TACGCGCTCG CCGGCCTGTT CGGCATCGCC
ATCGCGGTCA CCGCCATGCT GGCGCTGGCC GGCTTCATCG TCGCCCTCGA CGCGTTCGGA
CCCGTCACCG ACAATGCCGG CGGCATCGCC GAGATGGCGG GCCTGCCCGC CGAGGTGCGC
AAGTCGACCG ACGCCCTCGA CGCGGTCGGC AACACCACCA AGGCGGTGAC CAAGGGCTAC
GCGATCGGCT CGGCGGGCCT CGGCGCGCTG GTGCTGTTCG CCGCCTACAC GTCGGACCTG
AACTACTTCA TCGCCCATGC GAGCCCGACG CAGTACCGCT TCTTCCAGGG GGTCAGCGTC
GATTTCTCGC TCTCCAACCC GTACGTGGTG GTCGGGCTGC TGCTCGGCGG CCTGATCCCG
TTCCTGTTCG CCGGCATCGC CATGACGGCG GTCGGGCGCG CGGCGGGCGC GGTGGTCGAG
GAGGTCCGGC GCCAGTTCCG GGCCAAGCCC GGGATCATGC AGGGGACCGA CCGGCCGGAT
TACGGGCGGG CGGTGGACAT GCTGACCCGC GCGGCGATCA AGGAGATGAT CGTCCCCTCG
CTGCTGCCGG TCCTGTCGCC GGTGGTGCTG TTCTTCGTGA TCCAGTTCAT CGCCGGGAAG
AGCCAGGCCT TCGCCACCGT GGGCGCGAGC CTGCTCGGCG TGATCCTCAC CGGGCTCTAC
GTGGCGATCT CGATGACCTC GGGCGGCGGC GCCTGGGACA ACGCCAAGAA GTACATCGAG
GACGGCCACC ACGGCGGCAA GGGGTCCGAG GCCCACAAGG CGGCGGTGAC CGGCGACACG
GTCGGCGACC CCTACAAGGA CACCGCCGGT CCGGCGGTGA ACCCGGCGAT CAAGATCACC
AACATCATCG CCCTCCTGCT GCTCGCCGTG CTGGCGCATA GCTGA
 
Protein sequence
MIPLVLIIAG GLCAVAYGIV TILDVMRRDA GTQRMQEIAA AIAEGAQAYL RRQYTTIGLV 
GVVLFVLLAV FLGIKVAVGF LIGAVLSGAA GFIGMNVSVR ANVRTAQAAS TSLGGGLDVA
FKSGAVTGML VAGLALLGVA LYYLFLTRAA HLEPSSREVI DALVALGFGA SLISIFARLG
GGIFTKGADV GGDLVGKVEA GIPEDDPRNP ATIADNVGDN VGDCAGMAAD LFETYAVTVV
ATMVLAAIFF SGAGGSDRNV LEPMMLYPLA IGSACILTSI AGTYAVRLGA NQSIMGALYK
GLIAAGVLSI AAIAAVNMTL FGGFSTSFTT STGLTFTSGA LFGCAVIGLA ITALIVVITE
YYTGTNFRPV KSIADASVTG HGTNVIQGLA ISLESTALPA IVIVAGIIST YALAGLFGIA
IAVTAMLALA GFIVALDAFG PVTDNAGGIA EMAGLPAEVR KSTDALDAVG NTTKAVTKGY
AIGSAGLGAL VLFAAYTSDL NYFIAHASPT QYRFFQGVSV DFSLSNPYVV VGLLLGGLIP
FLFAGIAMTA VGRAAGAVVE EVRRQFRAKP GIMQGTDRPD YGRAVDMLTR AAIKEMIVPS
LLPVLSPVVL FFVIQFIAGK SQAFATVGAS LLGVILTGLY VAISMTSGGG AWDNAKKYIE
DGHHGGKGSE AHKAAVTGDT VGDPYKDTAG PAVNPAIKIT NIIALLLLAV LAHS