Gene Mrad2831_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3947 
Symbol 
ID6140002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4199370 
End bp4199993 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID641629658 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001756604 
Protein GI170750344 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.932005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGT TAAGGACCGA TGACCCGAAG AGCGCGGACT TCACGCTGAG CGAGGACCCC 
GTCGGGCTGT TCGCCGCCTG GATGAAGGAG GCCGAGGCCT CCGAGCCCGA GGACGCGAAC
GCGATGGCGC TCGCCACCGC CGGATCGGAC GGGCTGCCGG ACGTGCGGAT GGTCCTGTTG
AAGGACTTCG ACGCCCGCGG CTTCGTGTTC TACACCAACA CCCAGTCCAC CAAGGGCGAG
GAGCTGGCGC AGAACCCCCA GGCCGCCCTG GTGCTGCACT GGAAGAGCCT GCGCCGGCAG
GTGCGGGCCC GCGGGCCGAT CACGCCGGTC ACGGCCGCGG AGGCCGACGC CTATTTCCAG
AGCCGCCGCC GGGAGAGCCG CCTCGGTGCG ATCGCCAGCC AGCAATCCCG CCCGCTCGCG
GACCGCGCCA CGCTGATGTC GGCGGTGGCG GAGCTGTCCG AGCGCTACGG GGACGGGCCG
ATCCCCCGGC CTGAGCACTG GACCGGGTTC CGGATCGCGC CGGTGAGCGT CGAGTTCTGG
CAGAACGGCG ACTTCCGCCT GCACGACCGC GTGCGCTTCA CCCGGACGGG CGCGGGCTGG
AGCCGGGCGC GGCTCTATCC CTGA
 
Protein sequence
MDQLRTDDPK SADFTLSEDP VGLFAAWMKE AEASEPEDAN AMALATAGSD GLPDVRMVLL 
KDFDARGFVF YTNTQSTKGE ELAQNPQAAL VLHWKSLRRQ VRARGPITPV TAAEADAYFQ
SRRRESRLGA IASQQSRPLA DRATLMSAVA ELSERYGDGP IPRPEHWTGF RIAPVSVEFW
QNGDFRLHDR VRFTRTGAGW SRARLYP