Gene Mrad2831_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3946 
Symbol 
ID6140001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4198616 
End bp4199299 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID641629657 
Product50S ribosomal protein L25/general stress protein Ctc 
Protein accessionYP_001756603 
Protein GI170750343 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG TGAAGACGCT TGAGGCCGTG GCACGCGACC GGGTCGGCAA GGGGGCCGCC 
CGGGCCGTTC GTCGCCAGGG CCAGATTCCC GCCGTCATCT ACGGGGGCGG CCAGCCGCCG
CAATCCATCG CGGTCGACCT CATCCGCACC CGCACCCTGA TCTACGCCGG CGGCTTCAAG
ACCACGCTGT TCGAGATCAA CGCCGGCGGC AAGAAGGTCC GCGCGATCCC GCGCGACTTC
CAGCTCGACC CGGTGACCGG CGTGCCGCTG CACGTCGACT TCCTGCGCGT CGTCTCGGGC
CAGACCGTCA CGGTCGAGGT GCCGGTGCAC TTCGTCAACG AGGACGCGGC CCCCGGCATC
AAGAAGCTCG GCGGCACCCT CAACATCGTG GCCCACACGC TGAGCCTCGA GGTCGCCCCC
GACCAGATCC CGGACGCGAT CGAGGTCGAC CTGACCGGCC GCGCGATCGG CGACGTCATC
CACGTCTCCG ACATCAAGAT CCCGGCCGGC ACCTACACCG GCGAGGCGAC CGACCCGGTG
GCCAACATCG TGCCGCCGAC CGTGCTGGGC GCCGAGGTGG AGGCCGAGGA GGCCGCCATC
GCCGAGGCGC AGTCGGCCGA GGCCGCCGAG GAGAAGGCCG AGGAATCCGC CGAGGACGAG
AAGAAGGACG GCGAGGAGGC CTGA
 
Protein sequence
MSAVKTLEAV ARDRVGKGAA RAVRRQGQIP AVIYGGGQPP QSIAVDLIRT RTLIYAGGFK 
TTLFEINAGG KKVRAIPRDF QLDPVTGVPL HVDFLRVVSG QTVTVEVPVH FVNEDAAPGI
KKLGGTLNIV AHTLSLEVAP DQIPDAIEVD LTGRAIGDVI HVSDIKIPAG TYTGEATDPV
ANIVPPTVLG AEVEAEEAAI AEAQSAEAAE EKAEESAEDE KKDGEEA