| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3725 |
|---|
| Symbol | |
|---|
| ID | 6139778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3964691 |
|---|
| End bp | 3965719 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641629435 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_001756383 |
|---|
| Protein GI | 170750123 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0838427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTT CCATGGAAGA TTTGCCGCCG GCCGAGCGCC AGGCTCCCCT GCCGAGCGCT
GAGCGCCGCG GGCCGGAGGG GCGCCGTCCT CAGCGCGGGC CGCGTCCCGA CCGGCCGAAG
CGCCGGGACG TCTCGGGCTG GGTGATCCTC GACAAGCATG TCGGCATGAC TTCGACGCAC
GCGGTCGCGG TGGTGAAGCG CGCCTTCAAC GCCAAGAAGG CCGGCCATGC CGGCACCCTC
GACCCGCTGG CCTCCGGCAT CCTGCCGATC GCCCTCGGCG AGGCGACCAA GACCGTCCCG
TTCGTGATGG ACGGCCGCAA GGCCTACCGG TTCACCGTCC AGTGGGGCAT CGAGACCGAC
ACCGACGATG CCGAGGGGCG CCCCGTCGCG ACGAGCGATG CCCGCCCGGA CCGGGCGGCG
GTCGAGGCGG CGCTGCCGAC CTTCGTGGGG GCGATCGAGC AGGTCCCGCC GCGCTACTCC
GCCATCAAGA TCCAGGGCGA GCGTGCCTAC GACCTCGCCC GCGAAGGCGA GACCGTGGAG
CTGGTCGCCC GGCCAGTGCA GATCGACCGG CTCGCGGTGG TCGAGCACGA CGGCGAGCGC
ACGGTGATCG AGGCCGAGTG CGGCAAGGGC ACCTACGTGC GGGCGCTGGC CCGCGACCTC
GGGCGGATGC TCGGCTGCTA CGGCCACGTG GCCGCCCTGC GCCGGACCCG CGTCGGGCCC
TTCTCGGAGG CCGAGGCCTG CGCGGTCTCG GCCCTGACCG ACGGCAGCCC CGAGGCCGCC
CTCGCCTACC TGCGCCCCGT GGAGACGGCC CTCGACTCCA TCCCTGAGGT CGCGGTGTCG
CGCGATCTGG GCCTGCGCCT GATGCGGGGG CAGCCGGTCA TCCTGCGGGG CCGCGACGCC
CCCGTCGAGG GCAAGGCCTT CGCGACCTGC GCCGGCATCC TGGTCGCCGT GGGCGACGTG
GAGCGCGGCG AGCTGATCCC GCACCGGGTC TTCCACCTCG GCGGGACGGC CCCCGGCCGC
AGCGCCTGA
|
|---|
| Protein sequence | MTVSMEDLPP AERQAPLPSA ERRGPEGRRP QRGPRPDRPK RRDVSGWVIL DKHVGMTSTH
AVAVVKRAFN AKKAGHAGTL DPLASGILPI ALGEATKTVP FVMDGRKAYR FTVQWGIETD
TDDAEGRPVA TSDARPDRAA VEAALPTFVG AIEQVPPRYS AIKIQGERAY DLAREGETVE
LVARPVQIDR LAVVEHDGER TVIEAECGKG TYVRALARDL GRMLGCYGHV AALRRTRVGP
FSEAEACAVS ALTDGSPEAA LAYLRPVETA LDSIPEVAVS RDLGLRLMRG QPVILRGRDA
PVEGKAFATC AGILVAVGDV ERGELIPHRV FHLGGTAPGR SA
|
|---|
| |