Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_3614 |
Symbol | |
ID | 6139667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 3840679 |
End bp | 3842343 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641629325 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001756273 |
Protein GI | 170750013 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.315479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0101645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCCG TGGCCGGCCA GGCGAGCGCG GCCGCGCCCG GACGCAAGCC GGGTGCGGGG CAGGCGAGAG GAAGCAAGGC CGCGTCCGGC AAGGCCCCGG GCGGCCACAA TCCGTGGCTG ATCGCGGGCG TGGTGGCGCT GGCGACCTTC ATGGAGGTGC TCGACACCAC CATCGCCAAC GTGGCCCTGC GCTACATCTC GGGCGGGCTC GCGGTCGGCC CCGACGAGGC GGCCTGGGTG GTGACGAGCT ACCTCGTCGC CAACGCGATC ACCCTGACCG CGTCGAGCTT CCTGGCCAAG CGCTACGGCC GCAAGGCCTT CTTCATGTGG TCGGTGGCGC TGTTCACCGC CTCGTCGATC CTGTGCGGCT TCGCCTGGAG CCTGGAATCC CTGCTGCTGT TCCGGGTGAT GCAGGGGCTC GGCGGCGGCG GCATGGCGCC GCTCGCGCAG TCGATCCTGG CCGATTCCTT CCCGCCGGCG AAGCGCGGCC AGGCCTTCGC GCTCTACGGG GTCGCCATCG TGGTGGCGCC GGTGATCGGC CCGACGCTCG GCGGCTGGCT CTCCGACAAC GCTTCCTGGC ACTGGTGCTT CCTGATCAAC GGGCCGGTGG GCGTGATCGC CCTCGGGCTG ATGTACTGGC TGATCGAGGA CAGCGACGCG GCCAAGAAGG AGCGCCGCGC CCTGGTCCGC AAGGGCATCC GCTTCGACAT CGTCGGCTTC GTGCTGGTCG CCCTGTTCCT CGGCTCGCTG GAGGTGATCC TCGACGAGGG CCAGCGGAAG GACTGGTTCG GCACCTCGAC GCTGATGAAC GTCTCCGGCG TGCTGATGGT GGTCTCGTTC ATCGCCATGA TCCCGTGGCT GCTGACCCGC GAGAACCCGG TCGTCGACCT CCGCCTGATC GGCAACCGCC AGTTCGGGTC GTGCTTCCTG GTGATGATGT TCACCGGGGC GATCCTGATC GCCACCACGC AGTTCATCCC GCAGATCACG CAGGAATATT ACGGCTACAC CGCCACCCTG TCGGGCCTCG TCCTCGGCCC GGGCGGCATC GTCACGGTGG TGATGATGTT CCTCACCGGC CGGATCTCGT CCTACGTCCA GCCGAAATGG CTGATCGCCA CCGGCATGAC GATCGTGGCG CTCGGCATGT ACGACCTGAC CCGGATCGAC GGCAGCACGA CCTTCGCGTT CTTCGCGTGG TCGCGGGTCT ATATCGGCAT CGGCCTGCCG ATGGTGTTCC TGTCGATCAC CTCGGCCTCG TACGAGGGCA TCCGCAAGGA CCAGACCGAC CAGGCCTCGG CGCTGATCAA CGTCGCCCGC AACGTCGGCG GCTCGATGGG CGTCTCCCTG GCGCAGAACA TCCTGGCCTA CCGGAGCCAG TTCCATCAGA GCCGCCTGGT GGAGAGCGTC AACCCGGCCT CGCCGGCCTA CCAGGAGACC ATGCGGCAGG CGACGCAGTA CTTCTCCGAG CACGGCTACG CCGGTGTCGA GGCCCAGAAC CAGGCGACGG CGTGGATCGG GAGCGTGCTC AGCACCCAGG TGGCCTACTG GGCCTATATC GACGTGTTCT GGGTGCTCGG CCTCGTCGCC GCCTGCGCGG TCCCGCTGGC CCTGAGCCTG AAGAGCGTCA AGCTCGGCGG TGGGGCGCCG GCCGGGGGGC ACTGA
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Protein sequence | MSAVAGQASA AAPGRKPGAG QARGSKAASG KAPGGHNPWL IAGVVALATF MEVLDTTIAN VALRYISGGL AVGPDEAAWV VTSYLVANAI TLTASSFLAK RYGRKAFFMW SVALFTASSI LCGFAWSLES LLLFRVMQGL GGGGMAPLAQ SILADSFPPA KRGQAFALYG VAIVVAPVIG PTLGGWLSDN ASWHWCFLIN GPVGVIALGL MYWLIEDSDA AKKERRALVR KGIRFDIVGF VLVALFLGSL EVILDEGQRK DWFGTSTLMN VSGVLMVVSF IAMIPWLLTR ENPVVDLRLI GNRQFGSCFL VMMFTGAILI ATTQFIPQIT QEYYGYTATL SGLVLGPGGI VTVVMMFLTG RISSYVQPKW LIATGMTIVA LGMYDLTRID GSTTFAFFAW SRVYIGIGLP MVFLSITSAS YEGIRKDQTD QASALINVAR NVGGSMGVSL AQNILAYRSQ FHQSRLVESV NPASPAYQET MRQATQYFSE HGYAGVEAQN QATAWIGSVL STQVAYWAYI DVFWVLGLVA ACAVPLALSL KSVKLGGGAP AGGH
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