Gene Mrad2831_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3229 
Symbol 
ID6139277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3416351 
End bp3417577 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID641628939 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001755892 
Protein GI170749632 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCA AGGCTCTTGA TCTCACCGCG GCGGGACCCC GGCCCGCCAC GGCCGCGGCG 
CCCCGGGCAA GACCGGCGGT CCGCCTCGAC GGCGTGGTCA AGCGCTTCGG CGCGGTCACC
GCGCTGGAGG AGAGCTGGCT GCAGGTGGAG CAGGGCGAGT TCCTGACGCT GCTCGGACCC
TCGGGCTGCG GCAAGACCAC CCTGCTCAAC CTGATGGCGG GCTTCCTGGA GGCGGATGCG
GGCGAGATCT TCATCGGGGA CGACCTCGTG ACCGCCACCC CGCCCTACGA GCGCGAGGTC
GGCATCGTCT TCCAGAACTA CGCCCTGTTC CCGCACATGA GCGTCGCGAA GAACGTCGGC
TACGGTCTGC GCGTGCGCGG CGTGCCGAGA CGGGAGATCG CCGCGCGCGT GGAGGAGGTT
CTCGCCCTCG TGAAGCTCTC GGGCTTCGCG GACCGCTCGC CCCGGCAACT CTCCGGCGGG
CAGCAGCAGC GCGTCGCGCT CGCCCGCGCC CTCGTCATCC GCCCGAAGGT CCTGCTCCTC
GACGAGCCGT TCTCGGCGCT CGACAAGAAC TTGCGCGGGG CGATGCAGGT CGAGCTGAAG
GAGATCCAGC GCCGGCTCGG CGTGACGACG GTCTTCGTCA CGCACGACCA GGGAGAGGCG
CTGAGCATGT CGGACCGGAT CGTCGTGATG TCGGCCGGTC GCGTCCGGCA GATCGGCACA
CCGGATCAGG TGTACCGTCA CCCGCAGGAC CGCTTCGTGG CGGGCTTCAT CGGCGACGTG
AACCTCCTGC CCGGCCGCCT CGAAGCGCGG GCCGGCGAGC GCGCGACGGT CGCGATCGGT
GACCTGCGCC GCGAGGTCGA GGCCGACACC CTGCGGGACT GTGCGACCGG CGCCGCGGTC
GACGTGTTCG TGCGGCCGGA TCACCTCGGC GTGCGCCCGG CGGGCGAGAG CGGCACCCTG
CCGGCCCGGG TCGCGGCCCT CGTCTACCAG GGCTCGCACA TCGACCTGCA TATCGACCTG
CACGCCGACC TCCGTTCCGG TCCCATGAGC GGCGGGCGGG TGGTGGTGCG GATGCCGGGG
CACGGGGCGC TCGCCACCTA CGCCCCCGGA TCGCCGGTGG CCCTGCTCGT GCCGCAGGCA
GGCCTCGTCG CCTTCCCGGC CGAGCCGGGT AGCCCGAATG GACAAGCGGG CCGGACGGGC
TCGGGACAGG ACGATCCGGC CCGATGA
 
Protein sequence
MLSKALDLTA AGPRPATAAA PRARPAVRLD GVVKRFGAVT ALEESWLQVE QGEFLTLLGP 
SGCGKTTLLN LMAGFLEADA GEIFIGDDLV TATPPYEREV GIVFQNYALF PHMSVAKNVG
YGLRVRGVPR REIAARVEEV LALVKLSGFA DRSPRQLSGG QQQRVALARA LVIRPKVLLL
DEPFSALDKN LRGAMQVELK EIQRRLGVTT VFVTHDQGEA LSMSDRIVVM SAGRVRQIGT
PDQVYRHPQD RFVAGFIGDV NLLPGRLEAR AGERATVAIG DLRREVEADT LRDCATGAAV
DVFVRPDHLG VRPAGESGTL PARVAALVYQ GSHIDLHIDL HADLRSGPMS GGRVVVRMPG
HGALATYAPG SPVALLVPQA GLVAFPAEPG SPNGQAGRTG SGQDDPAR