| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3149 |
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| Symbol | |
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| ID | 6139196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 3329180 |
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| End bp | 3330358 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641628860 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001755814 |
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| Protein GI | 170749554 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.53519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCTG ACCATCACGC CCCCGACGCG GCCCTGCGCC TCGCGCAGGA CCTGATCCGC
TGTCCGTCCG TGACACCGGA AGATCGGGGC GCCCTCGACG TGGTCGCCGA CGCGCTCCGG
CCGGCCGGCT TCGCGATCGA GCGGCCGGTC TTCGCGGAGC CCGGCTATCC CGATACGCCG
AACCTCTACG CCCGCATCGG GCAGAACGGT CCGTGCCTCG TCTTTGCCGG CCACACCGAC
GTCGTGCCGG AGGGCGAGGG CGCCTGGCGC CACGATCCCT TCGCGGGCGC CGTGGCCGAC
GGGATGCTGT ACGGCCGGGG CGCGGCCGAC ATGAAGGGCG GCGTCGCCTG CATGCTCGCG
GCGACCCTCG CCTTCCTCGA CCGGCGCGGG GCCGATTTCG GCGGCTCCAT CGCGTTTCTG
ATCACCGGCG ACGAGGAGGG ACCCGCGGTC AACGGCACCG TGAAGCTCCT CGACTGGGCG
CGGCGCCGCG GCGAGCGATT CGACCATTGC GTGCTCGGGG AGCCGACCAA CCCGGGCCGG
CTCGGCGAGA TGATCAAGAT CGGCCGGCGC GGGTCGCTGA CCGGCAAGCT CACCGTGCTC
GGGCGGCAGG GCCACGTCGC CTACCCGCAC AAGGCCGAAA ACCCGATTCC CGGCCTGCTG
CGCCTCGCCT CGGCGCTGAT CGCCGAGCCT CTGGATCGTG GGACCGCGCA TTTCGACGCC
TCGAACCTCG AATTCACCAC GGTCGACGTC GGCAATCCAG CCACCAACGT GATCCCGTCG
ACCGCCCGGG CAACCTTCAA CGTCCGCTTC AACGACGACT GGACGGCCGA GAGCCTGGGC
GCCGAGATCC GCCGGCGCCT GGAGCAGGCG GCCGGGAACG CGGTCCGCTT CACCCTCGAC
CTCCAGCCCT CGAACGCGCC GGCCTTCCTG ACGCGGCCGG ACGCCTTCGT GACGCTCGTC
GCCGAGGCGA TCCGGGCCGA GACCGGTCTG ACGCCGACGC TCTCCACCAC CGGCGGCACG
TCGGACGCGC GCTTCATCAA GGATGCCTGC CCGGTGATCG AGTTCGGCCT CGTCGGCGAG
ACGATGCACC AGGTCGACGA ATGCGTGGCG GTCGCCGACC TCGAGCGGCT GACCGCGATC
TACGGGCGCG TGCTCGACGC CTATTTCCCG GGATCGTAG
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| Protein sequence | MPADHHAPDA ALRLAQDLIR CPSVTPEDRG ALDVVADALR PAGFAIERPV FAEPGYPDTP
NLYARIGQNG PCLVFAGHTD VVPEGEGAWR HDPFAGAVAD GMLYGRGAAD MKGGVACMLA
ATLAFLDRRG ADFGGSIAFL ITGDEEGPAV NGTVKLLDWA RRRGERFDHC VLGEPTNPGR
LGEMIKIGRR GSLTGKLTVL GRQGHVAYPH KAENPIPGLL RLASALIAEP LDRGTAHFDA
SNLEFTTVDV GNPATNVIPS TARATFNVRF NDDWTAESLG AEIRRRLEQA AGNAVRFTLD
LQPSNAPAFL TRPDAFVTLV AEAIRAETGL TPTLSTTGGT SDARFIKDAC PVIEFGLVGE
TMHQVDECVA VADLERLTAI YGRVLDAYFP GS
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