Gene Mrad2831_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3009 
Symbol 
ID6139054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3164291 
End bp3165325 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID641628721 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001755676 
Protein GI170749416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG ACCGCACGCC CCTGTCCCGC CGCCGATTCC TGGTGACCGG CTCGACGGCC 
CTCGTCGCCG GCACGCTGGC GGCCCCGCAC GTGGCGCGGG CGCAGAAGGC AGAGTTCACC
TACAAATACG CCAACAACCT GCCCGACACG CACCCGATGA ACATCCGCGC CCGCGAGATG
GCGGAGGCGC TCCGCACTGA GACCGGCGGC CGGTTCGACC TCAAGATCTT CCCGACGAGT
CAGCTCGGCT CCGACACCGA CACGCTGAGC CAGCTGCGCT CGGGCAGCGT CGAGTTCTTC
ACGATGTCGC CGCTGATTCT CTCGACCCTG GTGCCCAACG CGTCGATCAA CGGCATCGGC
TACGCGTTCC CGAGCTACGA TGCCGTCTGG CCGGCCATGG ACGGCGAGCT CGGCGCCTGG
GTCCGCCAGC AGATCGCCAA GGCCGGCCTC GTCGCCATGG AGAAGATCTG GGACAACGGC
TACCGGCAGA CCACCTCGTC CACCCGGCCG ATCGCCACGC CCGACGACTT CAAGGGCTTC
CGGATCCGCG TCCCGGTCTC GCCGCTCTGG ACCTCGATGT TCAAGGCCTT CGACGCGGCA
CCCGCCTCGA TCAACCTGAA CGAGACCTAC TCGGCCCTGC AGACCAAGAT CGTCGAAGGC
CAGGAGAACC CGCTCGCGGT CATCTCCACG ACGAAGTTCT ACGAGGTGCA GAAGTACTGC
TCGCTCACGA ACCACATGTG GGATGGGTAC TGGTTCCTGG CGAACCGCCG CGCCTGGGAG
CGCCTCCCGC CGGACCTGCG CGAGACGGTC GCCCGCCACA TCAACGCCGC CGGGATGAAG
GAGCGGGCCG ATGTCGCCCA GCTCAACGCC AACCTGCAGG CGGAACTCTC GAAGAACGGC
ATGGTCTTCA ACAAGCCCGA CCCTGAGCCC TTCCGCGACA AGCTGCGGAA GGCCGGTTTC
TACGCCGAGT GGAAGGGCCG GTACGGCGAG GAGGGCTGGT CGCTGCTCGA GAAGGCCTGC
GGGAAGCTCA CCTGA
 
Protein sequence
MSLDRTPLSR RRFLVTGSTA LVAGTLAAPH VARAQKAEFT YKYANNLPDT HPMNIRAREM 
AEALRTETGG RFDLKIFPTS QLGSDTDTLS QLRSGSVEFF TMSPLILSTL VPNASINGIG
YAFPSYDAVW PAMDGELGAW VRQQIAKAGL VAMEKIWDNG YRQTTSSTRP IATPDDFKGF
RIRVPVSPLW TSMFKAFDAA PASINLNETY SALQTKIVEG QENPLAVIST TKFYEVQKYC
SLTNHMWDGY WFLANRRAWE RLPPDLRETV ARHINAAGMK ERADVAQLNA NLQAELSKNG
MVFNKPDPEP FRDKLRKAGF YAEWKGRYGE EGWSLLEKAC GKLT