| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3006 |
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| Symbol | |
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| ID | 6139051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 3160284 |
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| End bp | 3162176 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641628718 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001755673 |
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| Protein GI | 170749413 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG ATGTTGCGGC CGTCGAGTCG ACGGCTGGGA TTGGGTTGTC GGGACCGCCA
CTGCGCGCCC GGGGCTGGCT GCGCCGGCTG GATGCCGGGC TCGGCTACCT CGTGGAGATC
CCGGCGGCGC TGCTCGTCCT GGCCGAGATC GCGGTGCTGC TCGGCGGTGT CGTCAGCCGT
TACGTGTTCC GTGACCCCAT CATCTGGTCG GACGAACTCG CCTCGATCCT GTTCCTGTGG
CTCGCCATGC TGGGCGCCGT GGTCGCCTTC CGGCGCGCCG AGCACATGCG CATGACCGCC
TTCGTGGCCA TGAGCGGCCC GCGTCTGCGC GCCTTCCTGG AGACCGTTGC TCTGGTCGCC
GGCCTGATCT TCGTGGCCCT GCTGCTGGAG CCGGCCTTCG AGTTCGCCAG CGAGGAGACC
TTCGTCCAGA CGCCGGCTCT GGAGCTCAAC AACGCCTGGC GCGCCGCCGC CCTGCCGATC
GGCCTCGGCC TCATGCTGAT CGTGGCCCTC ATCCGCCTCC TCGAGACCGC CGACTGGAAG
CTGACCGCGG GGGCGCTGGT CCTGGGCGGC GGCGTTGCCG CGGGCCTGCT GGCGCTGCAG
CCGTGGCTCG CCAACCTCGG CAATCTCAAC CTGCTGCTGT TCTTCGTCGT CGGCGTCGGC
GCGCTGGTCT TCTCCGGTGT GCCGATCGCC TTCGCGTTCG GCCTCTCGAC CTTCGCCTAC
ATCGCGCTCA CCACCGACGC GCCCTCCATG GTGGTGGTCG GCCGCATGGA CGAGGGCATG
AGCCACCTCA TCCTGCTCGC TGTGCCGCTC TTCGTGTTCC TCGGCCTGCT GATCGAGATG
ACCGGCATGG CCCGCGCCAT GGTCGGGTTC CTGGCCTCGT TGCTGGGCCA CGTGCGCGGC
GGCCTGCACT ACGTTCTGGT CGGGGCGATG TACCTCGTCT CGGGCATCTC CGGCTCGAAG
GCCGCCGACA TGGCGGCCGT GGCGCCGGTG CTGTTCCCCG AGATGAAGGC CCGGGGCGCC
AAGGAGGGCG ATCTCGTCGC TCTGCTCGCC ACCACCGGTG CGCAAACCGA AACAATCCCG
CCCTCGATCG TGCTGATCAC GATCGGCTCG GTCACCGGCG TCTCGATCAC CGCCCTGTTC
ACCGGCGGCC TGCTCCCGGG CCTCGTTCTG GCCGCGACGC TGTGCGCGCT GGTCTGGTGG
CGCTACCGCC GCGAGGACCT GAGCCACGTG GCTCGTCCGT CGGGCCGCGT CATCGGCCGC
GCCTTCCTGG TCGCGATCCC GGCGCTCGCC CTGCCCTTCG TGATCCGCTT CGCTGTCGTC
GAGGGAATCG CCACCGCCAC CGAGGTCTCG ACCATCGGCA TCGTCTACGC GGCTCTGGCA
GGTCTGCTGA TCTACCGCCA GTTCGAGTGG CGGCGGCTCT ACCCGATGCT GGTGACCACA
GCGACCCTGT CCGGCGCGAT CCTCCTGATC ATCGGCGCGG CCACCGGGAT GGCGTGGGCG
CTGACGCAGT CGGGCTTCTC TCAGACGCTC GCCGAGGTAA TGAAGAGCCT GCCGGGCGGC
GCGCTCGGCT TCCTGTTCGT CTCGGCCTTC GCCTTCATCA TCCTGGGCTC GGTGCTGGAG
GGCATCCCGG CGATCGTGCT GTTCGGGCCG CTCCTGTTCC CGATCGCGCG GGCGGTCGGC
GTCCACGAGG TCCACTACGC GATGGTGGTG ATCCTCGCGA TGGGAATCGG CCTGTTCGCC
CCGCCCTTCG GCGTCGGCTA CTACGCGGCC TGCGCCATCA GCCGGATCCA TCCCGATGCC
GGGATGCGCC CGATCGTCGG CTACATCGTG GCCCTGCTGA TCGGCCTCCT CGTCATCATC
CTCGTCCCCT GGTTCTCGAT CGGCTTCCTC TGA
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| Protein sequence | MQIDVAAVES TAGIGLSGPP LRARGWLRRL DAGLGYLVEI PAALLVLAEI AVLLGGVVSR
YVFRDPIIWS DELASILFLW LAMLGAVVAF RRAEHMRMTA FVAMSGPRLR AFLETVALVA
GLIFVALLLE PAFEFASEET FVQTPALELN NAWRAAALPI GLGLMLIVAL IRLLETADWK
LTAGALVLGG GVAAGLLALQ PWLANLGNLN LLLFFVVGVG ALVFSGVPIA FAFGLSTFAY
IALTTDAPSM VVVGRMDEGM SHLILLAVPL FVFLGLLIEM TGMARAMVGF LASLLGHVRG
GLHYVLVGAM YLVSGISGSK AADMAAVAPV LFPEMKARGA KEGDLVALLA TTGAQTETIP
PSIVLITIGS VTGVSITALF TGGLLPGLVL AATLCALVWW RYRREDLSHV ARPSGRVIGR
AFLVAIPALA LPFVIRFAVV EGIATATEVS TIGIVYAALA GLLIYRQFEW RRLYPMLVTT
ATLSGAILLI IGAATGMAWA LTQSGFSQTL AEVMKSLPGG ALGFLFVSAF AFIILGSVLE
GIPAIVLFGP LLFPIARAVG VHEVHYAMVV ILAMGIGLFA PPFGVGYYAA CAISRIHPDA
GMRPIVGYIV ALLIGLLVII LVPWFSIGFL
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